Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC091925.1-201ENST00000623204 462 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.42□□□□□ -2.18
RNF41Q9H4P4 AC112487.2-201ENST00000637950 304 ntBASIC1.42□□□□□ -2.18
RNF41Q9H4P4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.42□□□□□ -2.18
RNF41Q9H4P4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RNF41Q9H4P4 MIR424-201ENST00000362227 98 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 RNU6-454P-201ENST00000364292 107 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 Y_RNA.384-201ENST00000383909 102 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 MIR934-201ENST00000401241 83 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 AL161935.2-201ENST00000414627 60 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 AC114482.1-201ENST00000418010 247 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 MTND4P28-201ENST00000426217 387 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.41□□□□□ -2.18
RNF41Q9H4P4 TOMM22P2-201ENST00000430735 237 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 AL606517.2-201ENST00000442855 241 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 AC093019.1-201ENST00000443135 252 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.41□□□□□ -2.18
RNF41Q9H4P4 CHEK2P4-201ENST00000450340 246 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 SNORD19B-201ENST00000459623 84 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 RPS26P45-201ENST00000471748 340 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 RNU6-264P-201ENST00000517134 104 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 AC024995.1-201ENST00000523014 93 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.41□□□□□ -2.18
RNF41Q9H4P4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.41□□□□□ -2.18
RNF41Q9H4P4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.41□□□□□ -2.18
RNF41Q9H4P4 AC095038.3-201ENST00000634439 195 ntBASIC1.41□□□□□ -2.18
RNF41Q9H4P4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RNF41Q9H4P4 AC073544.1-201ENST00000600110 1595 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 RNU6-490P-201ENST00000362985 107 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 RNY3P11-201ENST00000364153 102 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 RNU6-392P-201ENST00000364926 101 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 SNORA4.2-201ENST00000365313 147 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RNF41Q9H4P4 SNORA69.1-201ENST00000390904 137 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 AL355796.1-201ENST00000406706 323 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 MIR1253-201ENST00000408273 105 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 RNU6-321P-201ENST00000410912 106 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.4□□□□□ -2.19
RNF41Q9H4P4 AC073910.1-201ENST00000445047 438 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 UQCRBP2-201ENST00000447827 297 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 SNORA40.9-201ENST00000515895 93 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 RNU6-699P-201ENST00000517081 110 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 AC022432.1-201ENST00000595739 310 ntBASIC1.4□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.187-201ENST00000363918 113 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.259-201ENST00000364619 101 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 SNORA72.2-201ENST00000365028 127 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.356-201ENST00000365475 113 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 RNU6-1040P-201ENST00000383974 107 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.463-201ENST00000384271 102 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 MIR515-2-201ENST00000384883 83 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 MIR515-1-201ENST00000384884 83 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 MIR194-1-201ENST00000384892 85 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 MIR625-201ENST00000385047 85 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 MIR30A-201ENST00000385092 71 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 SNORD12B-201ENST00000410433 91 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.39□□□□□ -2.19
RNF41Q9H4P4 AC005002.2-201ENST00000438228 269 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 AC005908.1-201ENST00000468701 347 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 AC010598.1-201ENST00000510378 103 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 RNU6-107P-201ENST00000516643 102 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.39□□□□□ -2.19
RNF41Q9H4P4 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.39□□□□□ -2.19
RNF41Q9H4P4 MIR3198-2-201ENST00000577868 80 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.39□□□□□ -2.19
RNF41Q9H4P4 AC022217.4-201ENST00000604389 163 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.39□□□□□ -2.19
RNF41Q9H4P4 MIR8074-201ENST00000615081 81 ntBASIC1.39□□□□□ -2.19
RNF41Q9H4P4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.58-201ENST00000362807 102 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.154-201ENST00000363624 102 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 RNY3P1-201ENST00000365085 102 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 RNY3-201ENST00000365484 102 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 RNU6-338P-201ENST00000383888 105 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.496-201ENST00000384444 101 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 Y_RNA.498-201ENST00000384460 102 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 RNA5SP109-201ENST00000391010 116 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF41Q9H4P4 JTBP1-201ENST00000441314 247 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AC069257.2-201ENST00000441819 155 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AC005840.1-201ENST00000498412 377 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AC025465.3-201ENST00000510570 311 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 TRMT112P2-201ENST00000512910 132 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 RNU7-4P-201ENST00000516961 62 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AL442163.3-201ENST00000554110 156 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AC055872.1-201ENST00000570978 278 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AC005828.6-201ENST00000606610 232 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AL359075.3-201ENST00000613288 217 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AC006435.5-201ENST00000624486 112 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 U6.115-201ENST00000636045 103 ntBASIC1.38□□□□□ -2.19
RNF41Q9H4P4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RNF41Q9H4P4 AL161722.3-201ENST00000605789 2983 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms