Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RNU6-165P-201ENST00000517170 99 ntBASIC1.21□□□□□ -2.22
DDX47Q9H0S4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.21□□□□□ -2.22
DDX47Q9H0S4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.21□□□□□ -2.22
DDX47Q9H0S4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.21□□□□□ -2.22
DDX47Q9H0S4 AL162424.1-201ENST00000602325 221 ntBASIC1.21□□□□□ -2.22
DDX47Q9H0S4 AC009229.3-201ENST00000608056 282 ntBASIC1.21□□□□□ -2.22
DDX47Q9H0S4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
DDX47Q9H0S4 MIR660-201ENST00000385235 97 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.2□□□□□ -2.22
DDX47Q9H0S4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AC107399.1-201ENST00000451226 265 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 RPL7P42-201ENST00000481005 679 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AC084782.3-201ENST00000612282 578 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AC104260.1-201ENST00000616660 539 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AC106754.2-201ENST00000623006 233 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AC068647.2-201ENST00000637380 353 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AC073544.1-201ENST00000600110 1595 ntBASIC1.2□□□□□ -2.22
DDX47Q9H0S4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
DDX47Q9H0S4 AL391987.6-201ENST00000305671 199 ntBASIC1.19□□□□□ -2.22
DDX47Q9H0S4 RNU6-879P-201ENST00000364328 108 ntBASIC1.19□□□□□ -2.22
DDX47Q9H0S4 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
DDX47Q9H0S4 MTND3P10-201ENST00000450967 341 ntBASIC1.19□□□□□ -2.22
DDX47Q9H0S4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.19□□□□□ -2.22
DDX47Q9H0S4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.19□□□□□ -2.22
DDX47Q9H0S4 AC074133.1-201ENST00000515696 183 ntBASIC1.19□□□□□ -2.22
DDX47Q9H0S4 RNU6-358P-201ENST00000516564 75 ntBASIC1.19□□□□□ -2.22
DDX47Q9H0S4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.19□□□□□ -2.22
DDX47Q9H0S4 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
DDX47Q9H0S4 AC099654.5-201ENST00000636479 350 ntBASIC1.19□□□□□ -2.22
DDX47Q9H0S4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
DDX47Q9H0S4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
DDX47Q9H0S4 SNORA27.1-201ENST00000362604 124 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 Y_RNA.88-201ENST00000363029 99 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 Y_RNA.404-201ENST00000383978 102 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 Y_RNA.482-201ENST00000384377 111 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 MTCYBP4-201ENST00000401524 249 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 FCF1P9-201ENST00000412546 282 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 RPL37P10-201ENST00000412884 288 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 AC018865.2-201ENST00000423631 129 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 MTND1P4-201ENST00000435196 415 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 UBE2V1P7-201ENST00000446395 340 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.18□□□□□ -2.22
DDX47Q9H0S4 AP002001.1-203ENST00000534002 267 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 AC018448.1-201ENST00000552843 316 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 MIR4778-201ENST00000577635 80 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 MIR3684-201ENST00000579779 74 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 AC011712.1-201ENST00000588959 234 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 SNORA28-201ENST00000606769 126 ntBASIC1.18□□□□□ -2.22
DDX47Q9H0S4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
DDX47Q9H0S4 MIR410-201ENST00000362222 80 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 Y_RNA.72-201ENST00000362894 103 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 RNU4-76P-201ENST00000364509 141 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 RNU6-407P-201ENST00000365280 104 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.17□□□□□ -2.22
DDX47Q9H0S4 DYNLT3P2-201ENST00000442517 295 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 PCNPP5-201ENST00000452246 481 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.17□□□□□ -2.22
DDX47Q9H0S4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 AC091021.1-201ENST00000468051 388 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 RNA5SP20-201ENST00000515976 84 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 RN7SKP49-201ENST00000516675 260 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 RNU6-922P-201ENST00000516753 99 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 AC022868.1-201ENST00000517767 391 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 AC091178.2-201ENST00000584401 117 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 AL359821.1-201ENST00000605519 182 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 AL157834.3-201ENST00000615543 103 ntBASIC1.17□□□□□ -2.22
DDX47Q9H0S4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
DDX47Q9H0S4 AC027514.1-201ENST00000588561 1603 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 Y_RNA.358-201ENST00000365491 99 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 RNU6-318P-201ENST00000384283 103 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.16□□□□□ -2.22
DDX47Q9H0S4 AC092423.1-201ENST00000430165 186 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 CALM2P4-201ENST00000430810 426 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.16□□□□□ -2.22
DDX47Q9H0S4 SCARNA16.2-201ENST00000516520 172 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 RNA5SP168-201ENST00000516642 112 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 RPL21P9-201ENST00000556149 474 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
DDX47Q9H0S4 AL513534.2-201ENST00000603836 250 ntBASIC1.16□□□□□ -2.22
DDX47Q9H0S4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.16□□□□□ -2.22
DDX47Q9H0S4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 RNU6-424P-201ENST00000384367 105 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 Y_RNA.498-201ENST00000384460 102 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 RNU11-5P-201ENST00000391216 129 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 RAB28P5-201ENST00000427490 651 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
DDX47Q9H0S4 RNU6-625P-201ENST00000459412 107 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.15□□□□□ -2.23
DDX47Q9H0S4 OR9P1P-201ENST00000496431 281 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.15□□□□□ -2.23
DDX47Q9H0S4 AC116353.2-201ENST00000505332 712 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms