Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RNU11-5P-201ENST00000391216 129 ntBASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 RPS15AP28-201ENST00000435088 386 ntBASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 RPS29P12-201ENST00000460178 152 ntBASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 SNORA48.11-201ENST00000517015 89 ntBASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 AC026403.1-201ENST00000518938 295 ntBASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 MIR3121-201ENST00000579680 77 ntBASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 SNORA68.1-201ENST00000364537 132 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 RNU6-1138P-201ENST00000365359 106 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 SNORA40.5-201ENST00000391061 128 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 AC093578.1-201ENST00000415219 368 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 AL513477.1-202ENST00000417061 214 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 CYCSP4-201ENST00000429682 331 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 CYCTP-201ENST00000504253 315 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 RNU1-95P-201ENST00000516357 160 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 RNU1-128P-201ENST00000516704 160 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 MIR2276-201ENST00000516886 89 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 Y_RNA.709-201ENST00000516952 92 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 RNU6-365P-201ENST00000517113 106 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 AL161756.2-201ENST00000604597 246 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 AL355297.2-201ENST00000604792 129 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 U2.20-201ENST00000613956 192 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 AC009093.8-201ENST00000641769 292 ntBASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.26□□□□□ -1.89
BHLHE41Q9C0J9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 MIR95-201ENST00000385072 81 ntBASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 AL603914.1-201ENST00000401964 204 ntBASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 RN7SKP111-201ENST00000410349 271 ntBASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 RNA5SP127-201ENST00000411051 133 ntBASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 AC233266.1-201ENST00000454518 96 ntBASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 AC007229.1-201ENST00000590455 412 ntBASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 AL356280.1-201ENST00000603614 379 ntBASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 AC242852.1-201ENST00000612151 96 ntBASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 AC244015.1-201ENST00000622301 99 ntBASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BHLHE41Q9C0J9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 RNU6-647P-201ENST00000364243 107 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 Y_RNA.280-201ENST00000364765 112 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 SNORA5A-201ENST00000384111 134 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 Y_RNA.486-201ENST00000384398 107 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 MIR483-201ENST00000385070 76 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 AC060773.1-201ENST00000421698 310 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 RNU1-104P-201ENST00000517280 175 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 CYCSP26-201ENST00000534107 320 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 AC007179.3-201ENST00000604976 235 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 AL670379.3-201ENST00000605040 251 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 MIR7153-201ENST00000637758 57 ntBASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BHLHE41Q9C0J9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 snoU2-30.2-201ENST00000362805 70 ntBASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 MIR34B-201ENST00000385076 84 ntBASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 AC011406.1-201ENST00000512440 370 ntBASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 SNORD33.1-201ENST00000516213 88 ntBASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 AC108081.1-201ENST00000604358 221 ntBASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 SNORA50A-202ENST00000629536 136 ntBASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
BHLHE41Q9C0J9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 RNA5SP72-201ENST00000364442 117 ntBASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 SNORA22-201ENST00000383907 134 ntBASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 MTATP6P21-201ENST00000440681 189 ntBASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 HMGN1P18-201ENST00000457642 277 ntBASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
BHLHE41Q9C0J9 AL356274.2-201ENST00000624379 3752 ntBASIC3.21□□□□□ -1.9
BHLHE41Q9C0J9 Y_RNA.52-201ENST00000362760 96 ntBASIC3.21□□□□□ -1.9
BHLHE41Q9C0J9 MIR561-201ENST00000385216 97 ntBASIC3.21□□□□□ -1.9
BHLHE41Q9C0J9 MIR624-201ENST00000385217 97 ntBASIC3.21□□□□□ -1.9
BHLHE41Q9C0J9 MIR548A3-201ENST00000385297 97 ntBASIC3.21□□□□□ -1.9
BHLHE41Q9C0J9 RPS29P4-201ENST00000414733 161 ntBASIC3.21□□□□□ -1.9
BHLHE41Q9C0J9 SNRPGP10-201ENST00000432323 225 ntBASIC3.21□□□□□ -1.9
BHLHE41Q9C0J9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.21□□□□□ -1.9
BHLHE41Q9C0J9 RN7SL807P-201ENST00000470923 297 ntBASIC3.21□□□□□ -1.9
BHLHE41Q9C0J9 HMGN1P7-201ENST00000491722 313 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 396.1 ms