Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RN7SKP271-201ENST00000410528 320 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC245047.3-201ENST00000429428 127 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 HMGN2P10-201ENST00000448085 265 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 snoU13.13-201ENST00000458842 104 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL705P-201ENST00000481678 294 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RPS29P20-201ENST00000489592 171 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC099522.1-202ENST00000514718 367 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP434-201ENST00000516647 121 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-856P-201ENST00000516959 98 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 IGKV3D-34-201ENST00000522638 302 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 IGLV3-6-201ENST00000523937 250 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 HMGN2P6-201ENST00000551091 273 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 HSPE1P5-201ENST00000561489 272 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC022655.2-201ENST00000577280 318 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC027229.1-201ENST00000583887 253 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORA4-201ENST00000584302 138 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR4298-201ENST00000584380 73 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORA62.6-201ENST00000606322 83 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORA51-201ENST00000606420 132 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORA74.4-201ENST00000607595 199 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 FTX_3.1-201ENST00000610451 147 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC092266.1-201ENST00000610958 165 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC131009.3-201ENST00000621809 287 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AL136228.1-201ENST00000622221 319 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC120057.5-201ENST00000623840 154 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AL132640.3-201ENST00000630473 177 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AC011504.1-201ENST00000623331 4103 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 AP000648.3-201ENST00000623539 4507 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 AL022311.1-201ENST00000623726 19416 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD16-201ENST00000362803 99 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU1-49P-201ENST00000363468 159 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-884P-201ENST00000363889 107 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 Y_RNA.204-201ENST00000364112 102 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-173P-201ENST00000364215 104 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP478-201ENST00000364657 115 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORA9.2-201ENST00000365361 133 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD45C-201ENST00000383893 79 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD38B-201ENST00000384690 67 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR433-201ENST00000384837 93 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR1294-201ENST00000408503 142 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP156-201ENST00000410250 110 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR1468-201ENST00000410600 86 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU2-37P-201ENST00000410695 177 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP104-201ENST00000410989 118 ntBASIC1.1□□□□□ -2.23
KRTAP4-4Q9BYR3 AL359092.1-201ENST00000417156 265 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms