Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 AC093852.1-201ENST00000503587 266 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 SCARNA16.2-201ENST00000516520 172 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 RN7SKP49-201ENST00000516675 260 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AL390123.1-201ENST00000603216 237 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AL078604.3-201ENST00000615580 211 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 AC092794.2-201ENST00000620933 563 ntBASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KLHDC3Q9BQ90 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 MIR410-201ENST00000362222 80 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 RNA5SP361-201ENST00000362686 118 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-879P-201ENST00000364328 108 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 MT-TL1-201ENST00000386347 75 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-440P-201ENST00000390882 105 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 RNU6-876P-201ENST00000391295 104 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 MTCYBP4-201ENST00000401524 249 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.599-201ENST00000410489 109 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 MTCO3P19-201ENST00000415864 321 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 SNX2P2-201ENST00000424553 323 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 RPL23AP50-201ENST00000434149 455 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 PGBD4P5-201ENST00000445958 426 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.635-201ENST00000459041 101 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AC097462.1-201ENST00000514125 324 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AC023157.2-201ENST00000540596 141 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AL162424.1-201ENST00000602325 221 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AL050343.2-201ENST00000607338 280 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AL357075.2-201ENST00000614906 189 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AL157834.3-201ENST00000615543 103 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AL353770.2-201ENST00000620024 78 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AC018630.2-201ENST00000534866 2403 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 AC073544.1-201ENST00000600110 1595 ntBASIC1.11□□□□□ -2.23
KLHDC3Q9BQ90 RNA5SP259-201ENST00000365541 109 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 AL034345.1-201ENST00000407768 123 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 PDCL2P1-201ENST00000419302 352 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 AL135790.2-201ENST00000437701 267 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 PCNPP5-201ENST00000452246 481 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 RPL30P7-201ENST00000479312 323 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 MIR2355-201ENST00000517199 87 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 AC022868.1-201ENST00000517767 391 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 AC027419.1-201ENST00000522976 328 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 RAB11AP2-201ENST00000545905 639 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 snoU13.31-201ENST00000607291 104 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 AL365434.2-201ENST00000607979 234 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 AL669831.3-213ENST00000636676 183 ntBASIC1.1□□□□□ -2.23
KLHDC3Q9BQ90 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 RNU1-22P-201ENST00000363334 158 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 Y_RNA.358-201ENST00000365491 99 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 SNORA20B-201ENST00000384220 132 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 AL355796.1-201ENST00000406706 323 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 U8.22-201ENST00000459141 133 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 AC018448.1-201ENST00000552843 316 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 AC073413.2-201ENST00000604332 360 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 AC080078.3-201ENST00000605407 463 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 AC122108.2-201ENST00000611946 526 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 AC022306.2-201ENST00000617563 647 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 AL513423.1-201ENST00000621695 132 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 TPTEP1-208ENST00000636884 213 ntBASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
KLHDC3Q9BQ90 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
KLHDC3Q9BQ90 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
KLHDC3Q9BQ90 Y_RNA.498-201ENST00000384460 102 ntBASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 MIR562-201ENST00000384894 95 ntBASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 SUMO1P2-201ENST00000452524 304 ntBASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 RNU6-625P-201ENST00000459412 107 ntBASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 MTND4P17-201ENST00000470444 350 ntBASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 RNU7-172P-201ENST00000517125 64 ntBASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 AL512310.8-201ENST00000550183 120 ntBASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 SNORA28-201ENST00000606769 126 ntBASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 MIR6079-201ENST00000635807 62 ntBASIC1.08□□□□□ -2.24
KLHDC3Q9BQ90 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 AL391987.6-201ENST00000305671 199 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 SNORA27.1-201ENST00000362604 124 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 RNU6-1301P-201ENST00000362724 104 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 SNORD81.2-201ENST00000365153 76 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 RNU6-318P-201ENST00000384283 103 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 SNORA12.1-201ENST00000390873 148 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 AC018865.2-201ENST00000423631 129 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 RAB28P5-201ENST00000427490 651 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 MIR2053-201ENST00000459295 91 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 SNORA40.9-201ENST00000515895 93 ntBASIC1.07□□□□□ -2.24
KLHDC3Q9BQ90 RNA5SP20-201ENST00000515976 84 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms