Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 U3.8-201ENST00000363675 217 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 RNU6-801P-201ENST00000364087 105 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 RNU6-1180P-201ENST00000364935 107 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 Y_RNA.304-201ENST00000365011 112 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 Y_RNA.308-201ENST00000365043 101 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 MIR548M-201ENST00000408260 86 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 MIR1261-201ENST00000408659 82 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.55□□□□□ -2
HAPLN3Q96S86 AC104389.3-201ENST00000445629 235 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.55□□□□□ -2
HAPLN3Q96S86 NDUFB4P10-201ENST00000452541 359 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HAPLN3Q96S86 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.55□□□□□ -2
HAPLN3Q96S86 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
HAPLN3Q96S86 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HAPLN3Q96S86 PRELID2P1-201ENST00000552837 301 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 AC090616.3-201ENST00000582184 217 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 AL355297.2-201ENST00000604792 129 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HAPLN3Q96S86 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
HAPLN3Q96S86 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
HAPLN3Q96S86 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
HAPLN3Q96S86 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.54□□□□□ -2
HAPLN3Q96S86 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.54□□□□□ -2
HAPLN3Q96S86 RNU6-324P-201ENST00000363957 106 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 RNU6-1305P-201ENST00000364353 104 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 MIR561-201ENST00000385216 97 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
HAPLN3Q96S86 MIR300-201ENST00000401138 83 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 AL031003.1-201ENST00000404229 172 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 RNU2-32P-201ENST00000411193 191 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 AC024067.1-201ENST00000426199 223 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 AL121890.1-201ENST00000435457 205 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 U8.19-201ENST00000459095 133 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 AC008413.1-201ENST00000511864 177 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 RNU6-1212P-201ENST00000517023 104 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 AL137100.2-201ENST00000555786 315 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 AC072026.1-201ENST00000605023 201 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 CTSLP2-204ENST00000629029 392 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 U6.115-201ENST00000636045 103 ntBASIC2.54□□□□□ -2
HAPLN3Q96S86 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
HAPLN3Q96S86 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HAPLN3Q96S86 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.54□□□□□ -2
HAPLN3Q96S86 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 Y_RNA.233-201ENST00000364407 101 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 Y_RNA.361-201ENST00000365515 120 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 MIR586-201ENST00000385035 97 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 RNU6-763P-201ENST00000390865 106 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 BTF3P11-201ENST00000426582 477 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 TOMM22P2-201ENST00000430735 237 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 RNU7-14P-201ENST00000459331 62 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 UBL5P3-201ENST00000475112 231 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 HMGN2P9-201ENST00000476875 229 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.53□□□□□ -2
HAPLN3Q96S86 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.53□□□□□ -2
HAPLN3Q96S86 YWHAEP4-201ENST00000505390 198 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.53□□□□□ -2
HAPLN3Q96S86 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 RNA5SP24-201ENST00000516478 95 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 AC109329.2-201ENST00000519658 482 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 AC064859.1-201ENST00000624741 174 ntBASIC2.53□□□□□ -2
HAPLN3Q96S86 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HAPLN3Q96S86 RNU1-23P-201ENST00000363361 144 ntBASIC2.52□□□□□ -2.01
HAPLN3Q96S86 RNA5SP125-201ENST00000364843 120 ntBASIC2.52□□□□□ -2.01
HAPLN3Q96S86 SNORA26.5-201ENST00000391215 123 ntBASIC2.52□□□□□ -2.01
HAPLN3Q96S86 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.52□□□□□ -2.01
HAPLN3Q96S86 ATP5EP1-201ENST00000510257 156 ntBASIC2.52□□□□□ -2.01
HAPLN3Q96S86 RNU6-1219P-201ENST00000516143 112 ntBASIC2.52□□□□□ -2.01
HAPLN3Q96S86 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.52□□□□□ -2.01
HAPLN3Q96S86 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.52□□□□□ -2.01
HAPLN3Q96S86 U4atac.1-201ENST00000618345 95 ntBASIC2.52□□□□□ -2.01
HAPLN3Q96S86 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HAPLN3Q96S86 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HAPLN3Q96S86 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HAPLN3Q96S86 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
HAPLN3Q96S86 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.51□□□□□ -2.01
HAPLN3Q96S86 Y_RNA.262-201ENST00000364641 102 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 RNU6-746P-201ENST00000384112 109 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 MIR1185-2-201ENST00000408687 86 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.51□□□□□ -2.01
HAPLN3Q96S86 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 SUMO2P18-201ENST00000518873 252 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 IGLV3-17-201ENST00000519099 244 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 MRPS18CP4-201ENST00000535821 231 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.51□□□□□ -2.01
HAPLN3Q96S86 MIR5692C2-201ENST00000577959 77 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 SNORD53-201ENST00000579969 78 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 MIR1248-201ENST00000629190 106 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.51□□□□□ -2.01
HAPLN3Q96S86 AC021753.1-201ENST00000635724 168 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 U6.106-201ENST00000636360 105 ntBASIC2.51□□□□□ -2.01
HAPLN3Q96S86 RNU6-1048P-201ENST00000364054 107 ntBASIC2.5□□□□□ -2.01
HAPLN3Q96S86 Y_RNA.240-201ENST00000364469 95 ntBASIC2.5□□□□□ -2.01
HAPLN3Q96S86 SNORD31B-201ENST00000364977 69 ntBASIC2.5□□□□□ -2.01
HAPLN3Q96S86 Y_RNA.435-201ENST00000384095 112 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms