Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM11Q96F44 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM11Q96F44 AC009093.8-201ENST00000641769 292 ntBASIC3.59□□□□□ -1.83
TRIM11Q96F44 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM11Q96F44 MIR302B-201ENST00000362188 73 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 snoU2_19.1-201ENST00000362361 80 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 RNU6-228P-201ENST00000362700 106 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 SNORA1-201ENST00000384107 130 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TRIM11Q96F44 RNU1-101P-201ENST00000391171 127 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 RNA5SP354-201ENST00000391247 136 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 RN7SKP202-201ENST00000410439 330 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 AL445687.1-201ENST00000439946 251 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 PGBD4P5-201ENST00000445958 426 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 AC106707.2-201ENST00000484182 374 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 AC011406.1-201ENST00000512440 370 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 RNU6-904P-201ENST00000516206 101 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 RNU6-1098P-201ENST00000516772 96 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 AC027419.1-201ENST00000522976 328 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM11Q96F44 AC092435.3-201ENST00000565538 3654 ntBASIC3.58□□□□□ -1.84
TRIM11Q96F44 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM11Q96F44 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM11Q96F44 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM11Q96F44 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TRIM11Q96F44 Y_RNA.93-201ENST00000363066 109 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 RNY1P10-201ENST00000363268 113 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 Y_RNA.213-201ENST00000364178 111 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 Y_RNA.342-201ENST00000365352 113 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 RNU6-1124P-201ENST00000384169 107 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 SNORD14D-201ENST00000384390 87 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 RNA5SP225-201ENST00000410874 135 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 AC010099.1-201ENST00000455434 375 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 AC008155.2-201ENST00000464337 397 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 RNA5SP395-201ENST00000516567 118 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 RNU6-1149P-201ENST00000516810 97 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM11Q96F44 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM11Q96F44 AP000867.2-201ENST00000532468 320 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 MIR4753-201ENST00000585119 83 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM11Q96F44 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.57□□□□□ -1.84
TRIM11Q96F44 AC073476.4-201ENST00000628409 72 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 MIR3202-2-201ENST00000635980 79 ntBASIC3.57□□□□□ -1.84
TRIM11Q96F44 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM11Q96F44 SNORD32B-201ENST00000364460 84 ntBASIC3.56□□□□□ -1.84
TRIM11Q96F44 RNA5SP479-201ENST00000364858 117 ntBASIC3.56□□□□□ -1.84
TRIM11Q96F44 RNU1-57P-201ENST00000384491 166 ntBASIC3.56□□□□□ -1.84
TRIM11Q96F44 AL117342.1-201ENST00000404861 406 ntBASIC3.56□□□□□ -1.84
TRIM11Q96F44 AC023141.4-201ENST00000412031 328 ntBASIC3.56□□□□□ -1.84
TRIM11Q96F44 AL133547.1-201ENST00000448546 220 ntBASIC3.56□□□□□ -1.84
TRIM11Q96F44 AL031183.1-201ENST00000457667 207 ntBASIC3.56□□□□□ -1.84
TRIM11Q96F44 AC141557.1-201ENST00000540982 400 ntBASIC3.56□□□□□ -1.84
TRIM11Q96F44 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM11Q96F44 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM11Q96F44 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TRIM11Q96F44 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM11Q96F44 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM11Q96F44 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM11Q96F44 RNA5SP124-201ENST00000362739 110 ntBASIC3.55□□□□□ -1.84
TRIM11Q96F44 MIR147B-201ENST00000390185 80 ntBASIC3.55□□□□□ -1.84
TRIM11Q96F44 SNORD17-201ENST00000390930 237 ntBASIC3.55□□□□□ -1.84
TRIM11Q96F44 AL031121.1-201ENST00000406553 254 ntBASIC3.55□□□□□ -1.84
TRIM11Q96F44 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TRIM11Q96F44 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM11Q96F44 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM11Q96F44 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM11Q96F44 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM11Q96F44 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM11Q96F44 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM11Q96F44 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM11Q96F44 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM11Q96F44 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM11Q96F44 RNU4-35P-201ENST00000362588 141 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 RNA5SP383-201ENST00000362934 120 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 Y_RNA.107-201ENST00000363190 121 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 RNU6-414P-201ENST00000363705 104 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 RNU6-975P-201ENST00000384296 105 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 MIR554-201ENST00000384874 96 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 MIR218-2-201ENST00000385006 110 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 MIR759-201ENST00000390224 91 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM11Q96F44 RNU6-57P-201ENST00000411348 103 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM11Q96F44 RPS4XP11-201ENST00000446897 772 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 AC084364.2-201ENST00000546924 395 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM11Q96F44 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM11Q96F44 JPX_2.1-201ENST00000614161 69 ntBASIC3.54□□□□□ -1.84
TRIM11Q96F44 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM11Q96F44 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM11Q96F44 AC010680.1-201ENST00000590024 3590 ntBASIC3.53□□□□□ -1.84
TRIM11Q96F44 Y_RNA.466-201ENST00000384294 113 ntBASIC3.53□□□□□ -1.84
TRIM11Q96F44 Y_RNA.593-201ENST00000410292 98 ntBASIC3.53□□□□□ -1.84
TRIM11Q96F44 CST9LP2-201ENST00000437612 320 ntBASIC3.53□□□□□ -1.84
TRIM11Q96F44 RN7SL442P-201ENST00000473804 320 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms