Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 Y_RNA.8-201ENST00000362353 102 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 snoU2_19.4-201ENST00000364329 80 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 RNU6-160P-201ENST00000384591 107 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 RNU6-1135P-201ENST00000411083 103 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 AL353689.1-201ENST00000438895 199 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 RNU1-131P-201ENST00000458943 161 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 RNU6-437P-201ENST00000459408 95 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 AC091153.1-201ENST00000466297 402 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 MIR5680-201ENST00000577577 84 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 AC026271.5-201ENST00000577873 130 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 MIR3133-201ENST00000583157 78 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 MIR5195-201ENST00000583555 115 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 U6.73-201ENST00000619194 103 ntBASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
FOXRED1Q96CU9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 AC068700.1-201ENST00000565862 3754 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 Y_RNA.272-201ENST00000364696 102 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 RNU6-804P-201ENST00000384286 107 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 SNORA72-201ENST00000384339 132 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 Y_RNA.506-201ENST00000384494 102 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 RNU6-1228P-201ENST00000391014 107 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 AL512604.1-201ENST00000404812 257 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 RPS15AP28-201ENST00000435088 386 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 UBBP3-201ENST00000445497 241 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 RNU6-1007P-201ENST00000516586 107 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 AC015720.1-201ENST00000565251 277 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 LARP7P3-201ENST00000579888 337 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 AC007229.1-201ENST00000590455 412 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 MTND1P7-201ENST00000632801 297 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 AP006437.1-201ENST00000641440 3685 ntBASIC2.63□□□□□ -1.99
FOXRED1Q96CU9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 Y_RNA.170-201ENST00000363746 110 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 RNU6-674P-201ENST00000363831 107 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 SNORD56.5-201ENST00000364281 72 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 Y_RNA.229-201ENST00000364347 113 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 RNY1P5-201ENST00000383890 115 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 RNU6-136P-201ENST00000384663 107 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 Y_RNA.572-201ENST00000384757 98 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 RNU6-443P-201ENST00000384780 107 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 RN7SKP284-201ENST00000411002 343 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 HMGN2P35-201ENST00000412164 270 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 AC245047.8-201ENST00000456455 284 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 RN7SL636P-201ENST00000497504 294 ntBASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXRED1Q96CU9 AC009487.2-201ENST00000420969 6821 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 SNORA70.4-201ENST00000365509 134 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 SNORA7.4-201ENST00000384249 137 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 RNU6-125P-201ENST00000384505 107 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 RNU6-417P-201ENST00000384712 107 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 RNA5SP496-201ENST00000391240 109 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 SNORA11.1-201ENST00000408133 129 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 RNU6-383P-201ENST00000410864 94 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 SEPT7P4-201ENST00000437076 306 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 RN7SL863P-201ENST00000462370 296 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 SNORA70.24-201ENST00000517233 118 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 MIR5004-201ENST00000579078 107 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 MIR4431-201ENST00000579990 94 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 MIR2681-201ENST00000581814 105 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 AC093732.2-201ENST00000607950 274 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 MIR7112-201ENST00000616126 65 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 MIR6733-201ENST00000635723 61 ntBASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
FOXRED1Q96CU9 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 MIR208A-201ENST00000362287 71 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 SNORA38-201ENST00000363946 132 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 RNU1-96P-201ENST00000364163 162 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms