Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SNORA31.9-201ENST00000516429 84 ntBASIC3.72□□□□□ -1.81
HPS1Q92902 HSPE1P19-201ENST00000603327 295 ntBASIC3.72□□□□□ -1.81
HPS1Q92902 AC113403.1-201ENST00000604910 193 ntBASIC3.72□□□□□ -1.81
HPS1Q92902 U2.20-201ENST00000613956 192 ntBASIC3.72□□□□□ -1.81
HPS1Q92902 AC140479.6-201ENST00000633535 357 ntBASIC3.72□□□□□ -1.81
HPS1Q92902 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HPS1Q92902 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.72□□□□□ -1.81
HPS1Q92902 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HPS1Q92902 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HPS1Q92902 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HPS1Q92902 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.72□□□□□ -1.81
HPS1Q92902 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
HPS1Q92902 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
HPS1Q92902 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.71□□□□□ -1.82
HPS1Q92902 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
HPS1Q92902 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.71□□□□□ -1.82
HPS1Q92902 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS1Q92902 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS1Q92902 RNA5SP175-201ENST00000364275 119 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS1Q92902 SNORD66.1-201ENST00000391230 76 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 SNORA11F-201ENST00000408237 128 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 MIR1253-201ENST00000408273 105 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 AP001486.1-201ENST00000463339 476 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 RNU6-1291P-201ENST00000516591 104 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 AC004812.1-201ENST00000540773 146 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HPS1Q92902 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.71□□□□□ -1.82
HPS1Q92902 MIR4439-201ENST00000583746 80 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.71□□□□□ -1.82
HPS1Q92902 AC078899.2-201ENST00000595282 212 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.71□□□□□ -1.82
HPS1Q92902 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HPS1Q92902 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.71□□□□□ -1.82
HPS1Q92902 AC095038.3-201ENST00000634439 195 ntBASIC3.71□□□□□ -1.82
HPS1Q92902 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
HPS1Q92902 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HPS1Q92902 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS1Q92902 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
HPS1Q92902 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HPS1Q92902 RNA5SP479-201ENST00000364858 117 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 SNORD58A-201ENST00000383875 65 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RNU6-442P-201ENST00000383968 104 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 Y_RNA.430-201ENST00000384081 110 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RNU6-1201P-201ENST00000384227 107 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RNU6-198P-201ENST00000384258 104 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 SNORA37-201ENST00000384504 129 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RNU6-1274P-201ENST00000384557 107 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 Y_RNA.565-201ENST00000384719 101 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RNU4-69P-201ENST00000410677 143 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RNA5SP144-201ENST00000410846 116 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RPS15AP28-201ENST00000435088 386 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 AP000873.1-201ENST00000463987 400 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RAC1P2-201ENST00000511164 579 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RNU7-99P-201ENST00000516271 62 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 SNORA18.7-201ENST00000516910 131 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 RNU6-341P-201ENST00000516973 96 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.7□□□□□ -1.82
HPS1Q92902 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 AC012531.5-201ENST00000611375 151 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 MIR6076-201ENST00000617521 113 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 AF117829.1-206ENST00000621883 3802 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 MIR492-201ENST00000638676 116 ntBASIC3.7□□□□□ -1.82
HPS1Q92902 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HPS1Q92902 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HPS1Q92902 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.7□□□□□ -1.82
HPS1Q92902 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.69□□□□□ -1.82
HPS1Q92902 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HPS1Q92902 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HPS1Q92902 RNU6-633P-201ENST00000362612 103 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 Y_RNA.191-201ENST00000363972 113 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 RNU4-16P-201ENST00000364737 141 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 Y_RNA.299-201ENST00000364973 94 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 CRYBB2P1-203ENST00000415709 538 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 AL512326.2-201ENST00000426359 151 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.69□□□□□ -1.82
HPS1Q92902 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.69□□□□□ -1.82
HPS1Q92902 AC087499.4-201ENST00000448505 178 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 RPL23AP63-201ENST00000498752 471 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 AP003484.1-201ENST00000530974 250 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 ZYXP1-201ENST00000617638 118 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.69□□□□□ -1.82
HPS1Q92902 MIR7702-201ENST00000621931 59 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 U6.98-201ENST00000637157 84 ntBASIC3.69□□□□□ -1.82
HPS1Q92902 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.69□□□□□ -1.82
HPS1Q92902 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.69□□□□□ -1.82
HPS1Q92902 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
HPS1Q92902 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HPS1Q92902 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HPS1Q92902 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HPS1Q92902 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HPS1Q92902 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HPS1Q92902 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HPS1Q92902 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HPS1Q92902 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HPS1Q92902 MIR383-201ENST00000362257 73 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 RNU6-268P-201ENST00000364174 107 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 RNU6-1229P-201ENST00000364295 107 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms