Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM41Q8WV44 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM41Q8WV44 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM41Q8WV44 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM41Q8WV44 MIR30E-201ENST00000362104 92 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 Y_RNA.52-201ENST00000362760 96 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM41Q8WV44 AC016717.1-201ENST00000448918 286 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 AC021205.2-201ENST00000480069 347 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 RNU6-412P-201ENST00000516434 106 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 RNA5SP24-201ENST00000516478 95 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 RNA5SP367-201ENST00000516557 118 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM41Q8WV44 AC008739.2-201ENST00000597006 317 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 AC002076.2-201ENST00000617362 122 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 U7.8-201ENST00000619968 63 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 AC064859.1-201ENST00000624741 174 ntBASIC5.53□□□□□ -1.52
TRIM41Q8WV44 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TRIM41Q8WV44 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TRIM41Q8WV44 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM41Q8WV44 Y_RNA.796-201ENST00000364268 102 ntBASIC5.52□□□□□ -1.53
TRIM41Q8WV44 SNORD73B-201ENST00000364394 72 ntBASIC5.52□□□□□ -1.53
TRIM41Q8WV44 Y_RNA.799-201ENST00000364992 102 ntBASIC5.52□□□□□ -1.53
TRIM41Q8WV44 RNU6-750P-201ENST00000390946 107 ntBASIC5.52□□□□□ -1.53
TRIM41Q8WV44 MIR300-201ENST00000401138 83 ntBASIC5.52□□□□□ -1.53
TRIM41Q8WV44 RNA5SP229-201ENST00000410809 99 ntBASIC5.52□□□□□ -1.53
TRIM41Q8WV44 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM41Q8WV44 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM41Q8WV44 AC010099.1-201ENST00000455434 375 ntBASIC5.52□□□□□ -1.53
TRIM41Q8WV44 RNU1-104P-201ENST00000517280 175 ntBASIC5.52□□□□□ -1.53
TRIM41Q8WV44 uc_338.1-201ENST00000612113 180 ntBASIC5.52□□□□□ -1.53
TRIM41Q8WV44 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM41Q8WV44 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM41Q8WV44 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM41Q8WV44 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM41Q8WV44 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM41Q8WV44 RNU6-106P-201ENST00000384405 107 ntBASIC5.51□□□□□ -1.53
TRIM41Q8WV44 RNU6-554P-201ENST00000410466 106 ntBASIC5.51□□□□□ -1.53
TRIM41Q8WV44 AC015720.1-201ENST00000565251 277 ntBASIC5.51□□□□□ -1.53
TRIM41Q8WV44 AP003122.5-201ENST00000527668 3766 ntBASIC5.51□□□□□ -1.53
TRIM41Q8WV44 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TRIM41Q8WV44 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM41Q8WV44 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM41Q8WV44 SNORD32B-201ENST00000364460 84 ntBASIC5.5□□□□□ -1.53
TRIM41Q8WV44 MIRLET7F2-201ENST00000385277 83 ntBASIC5.5□□□□□ -1.53
TRIM41Q8WV44 EEF1A1P41-201ENST00000414667 207 ntBASIC5.5□□□□□ -1.53
TRIM41Q8WV44 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM41Q8WV44 SNORD77.4-201ENST00000516158 81 ntBASIC5.5□□□□□ -1.53
TRIM41Q8WV44 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TRIM41Q8WV44 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
TRIM41Q8WV44 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM41Q8WV44 SNORA26-201ENST00000391286 122 ntBASIC5.49□□□□□ -1.53
TRIM41Q8WV44 RNU7-23P-201ENST00000459465 62 ntBASIC5.49□□□□□ -1.53
TRIM41Q8WV44 CKS1BP2-201ENST00000497342 240 ntBASIC5.49□□□□□ -1.53
TRIM41Q8WV44 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM41Q8WV44 MIR2681-201ENST00000581814 105 ntBASIC5.49□□□□□ -1.53
TRIM41Q8WV44 Pinc.1-201ENST00000616452 154 ntBASIC5.49□□□□□ -1.53
TRIM41Q8WV44 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC5.49□□□□□ -1.53
TRIM41Q8WV44 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM41Q8WV44 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM41Q8WV44 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM41Q8WV44 AC091564.4-201ENST00000533934 2194 ntBASIC5.49□□□□□ -1.53
TRIM41Q8WV44 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM41Q8WV44 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRIM41Q8WV44 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM41Q8WV44 Y_RNA.203-201ENST00000364106 102 ntBASIC5.48□□□□□ -1.53
TRIM41Q8WV44 RNA5SP127-201ENST00000411051 133 ntBASIC5.48□□□□□ -1.53
TRIM41Q8WV44 MTATP6P21-201ENST00000440681 189 ntBASIC5.48□□□□□ -1.53
TRIM41Q8WV44 RNU6-221P-201ENST00000459541 99 ntBASIC5.48□□□□□ -1.53
TRIM41Q8WV44 RPS27P22-201ENST00000478056 241 ntBASIC5.48□□□□□ -1.53
TRIM41Q8WV44 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM41Q8WV44 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM41Q8WV44 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM41Q8WV44 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM41Q8WV44 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM41Q8WV44 RNU6-1107P-201ENST00000364817 104 ntBASIC5.47□□□□□ -1.53
TRIM41Q8WV44 RNA5SP125-201ENST00000364843 120 ntBASIC5.47□□□□□ -1.53
TRIM41Q8WV44 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM41Q8WV44 Z98742.2-201ENST00000431564 187 ntBASIC5.47□□□□□ -1.53
TRIM41Q8WV44 AC105272.1-201ENST00000438604 198 ntBASIC5.47□□□□□ -1.53
TRIM41Q8WV44 AL135938.1-201ENST00000443141 297 ntBASIC5.47□□□□□ -1.53
TRIM41Q8WV44 AC079598.5-201ENST00000547460 117 ntBASIC5.47□□□□□ -1.53
TRIM41Q8WV44 RNVU1-4-201ENST00000612985 164 ntBASIC5.47□□□□□ -1.53
TRIM41Q8WV44 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM41Q8WV44 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
TRIM41Q8WV44 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM41Q8WV44 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM41Q8WV44 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM41Q8WV44 Y_RNA.528-201ENST00000384575 108 ntBASIC5.46□□□□□ -1.54
TRIM41Q8WV44 AL021397.1-201ENST00000451806 248 ntBASIC5.46□□□□□ -1.54
TRIM41Q8WV44 AC010531.2-201ENST00000465012 153 ntBASIC5.46□□□□□ -1.54
TRIM41Q8WV44 NDUFB9P3-201ENST00000521269 501 ntBASIC5.46□□□□□ -1.54
TRIM41Q8WV44 PRELID2P1-201ENST00000552837 301 ntBASIC5.46□□□□□ -1.54
TRIM41Q8WV44 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM41Q8WV44 SNORD53-201ENST00000579969 78 ntBASIC5.46□□□□□ -1.54
TRIM41Q8WV44 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM41Q8WV44 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM41Q8WV44 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM41Q8WV44 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TRIM41Q8WV44 RNU6-975P-201ENST00000384296 105 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms