Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 RN7SL636P-201ENST00000497504 294 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 MRPS36P2-201ENST00000512569 299 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 RNA5SP76-201ENST00000516277 87 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 MIR4524B-201ENST00000581569 115 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 RPL30P11-203ENST00000598995 310 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 AC013791.1-201ENST00000616619 62 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 AC010329.5-201ENST00000623497 2174 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 AC134026.1-201ENST00000623249 2239 ntBASIC2.87□□□□□ -1.95
SHCBP1Q8NEM2 AC080100.1-201ENST00000624239 5356 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.121-201ENST00000363309 113 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.182-201ENST00000363880 111 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 SNORD116-18-201ENST00000383961 92 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 SNORA72.4-201ENST00000384174 132 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.580-201ENST00000391004 95 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-381P-201ENST00000391259 108 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 AL356320.1-201ENST00000429616 163 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 RPS29P21-201ENST00000496272 170 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-1098P-201ENST00000516772 96 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 AC103810.1-201ENST00000579873 453 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 AL670379.2-201ENST00000604983 252 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 MIR6733-201ENST00000635723 61 ntBASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.86□□□□□ -1.95
SHCBP1Q8NEM2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.75-201ENST00000362927 97 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 MIR586-201ENST00000385035 97 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 AL590004.2-201ENST00000404787 371 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-710P-201ENST00000410424 105 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 RPS27AP9-201ENST00000477681 438 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 SCARNA17.1-201ENST00000516211 143 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 SCARNA17.2-201ENST00000516334 143 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 MIR4765-201ENST00000585007 77 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 RPL17P51-201ENST00000605218 238 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 AC016717.2-201ENST00000609089 5141 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
SHCBP1Q8NEM2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.23-201ENST00000362496 106 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 RNA5SP456-201ENST00000364002 114 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 RNU4-10P-201ENST00000364383 140 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 SNORA68.1-201ENST00000364537 132 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-312P-201ENST00000364629 107 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.287-201ENST00000364853 94 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 Y_RNA.368-201ENST00000365547 113 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 RNU6-855P-201ENST00000410395 104 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 RN7SKP223-201ENST00000410582 62 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 SEPT7P4-201ENST00000437076 306 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 HMGN2P9-201ENST00000476875 229 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 AC234781.5-201ENST00000508429 271 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 MIR449C-201ENST00000516047 92 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 AC021269.2-201ENST00000532318 330 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 AC023043.3-201ENST00000593113 385 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 AC090517.3-201ENST00000625170 141 ntBASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.84□□□□□ -1.95
SHCBP1Q8NEM2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SHCBP1Q8NEM2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SHCBP1Q8NEM2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 snoU2_19.4-201ENST00000364329 80 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 Y_RNA.291-201ENST00000364886 113 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 Y_RNA.310-201ENST00000365063 113 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 MIR29B2-201ENST00000385055 81 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 AL513477.1-202ENST00000417061 214 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 RPS20P10-201ENST00000451209 253 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 SCARNA11.3-201ENST00000517276 130 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 MIR4648-201ENST00000580107 72 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 MIR4769-201ENST00000584126 77 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 AP001485.1-201ENST00000604799 199 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 MTND1P7-201ENST00000632801 297 ntBASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHCBP1Q8NEM2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHCBP1Q8NEM2 RNU4-84P-201ENST00000364200 139 ntBASIC2.82□□□□□ -1.96
SHCBP1Q8NEM2 SNORD114-30-201ENST00000364448 72 ntBASIC2.82□□□□□ -1.96
SHCBP1Q8NEM2 RNU6-275P-201ENST00000364910 107 ntBASIC2.82□□□□□ -1.96
SHCBP1Q8NEM2 Y_RNA.341-201ENST00000365341 102 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms