Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RNU6-151P-201ENST00000364158 107 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 RNA5SP125-201ENST00000364843 120 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 SNORA72-201ENST00000384339 132 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 MIR592-201ENST00000384959 97 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 MIR15B-201ENST00000385045 98 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 MIR181B1-201ENST00000385240 110 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 RNA5SP496-201ENST00000391240 109 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 AL606753.1-201ENST00000427435 87 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.18□□□□□ -1.9
PHC3Q8NDX5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.18□□□□□ -1.9
PHC3Q8NDX5 AC090616.3-201ENST00000582184 217 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 AC093732.2-201ENST00000607950 274 ntBASIC3.18□□□□□ -1.9
PHC3Q8NDX5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.18□□□□□ -1.9
PHC3Q8NDX5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.18□□□□□ -1.9
PHC3Q8NDX5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PHC3Q8NDX5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PHC3Q8NDX5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PHC3Q8NDX5 RNU6-525P-201ENST00000363685 104 ntBASIC3.17□□□□□ -1.9
PHC3Q8NDX5 Y_RNA.337-201ENST00000365312 102 ntBASIC3.17□□□□□ -1.9
PHC3Q8NDX5 SNORA25B-201ENST00000365507 128 ntBASIC3.17□□□□□ -1.9
PHC3Q8NDX5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHC3Q8NDX5 MT-TT-201ENST00000387460 66 ntBASIC3.17□□□□□ -1.9
PHC3Q8NDX5 HMGN2P34-201ENST00000437647 269 ntBASIC3.17□□□□□ -1.9
PHC3Q8NDX5 RNU7-121P-201ENST00000516604 62 ntBASIC3.17□□□□□ -1.9
PHC3Q8NDX5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
PHC3Q8NDX5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
PHC3Q8NDX5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHC3Q8NDX5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHC3Q8NDX5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PHC3Q8NDX5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHC3Q8NDX5 Y_RNA.215-201ENST00000364204 112 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 RNU4-41P-201ENST00000364426 143 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.16□□□□□ -1.9
PHC3Q8NDX5 RNU6-136P-201ENST00000384663 107 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 SNORA46-201ENST00000384762 135 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 MIR627-201ENST00000384979 97 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 RNU11-5P-201ENST00000391216 129 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 AC006461.1-201ENST00000412637 326 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 AL445687.1-201ENST00000439946 251 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 AC009238.1-201ENST00000442165 424 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 AC009237.6-201ENST00000446969 424 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 AC018868.1-201ENST00000491307 315 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 MIR5680-201ENST00000577577 84 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 U2.20-201ENST00000613956 192 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 U4atac.1-201ENST00000618345 95 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 MIR6733-201ENST00000635723 61 ntBASIC3.16□□□□□ -1.9
PHC3Q8NDX5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.16□□□□□ -1.9
PHC3Q8NDX5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PHC3Q8NDX5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
PHC3Q8NDX5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PHC3Q8NDX5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PHC3Q8NDX5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.16□□□□□ -1.9
PHC3Q8NDX5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
PHC3Q8NDX5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PHC3Q8NDX5 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 AC060773.1-201ENST00000421698 310 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 RPL39P40-201ENST00000445481 146 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 RN7SL504P-201ENST00000494496 287 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.15□□□□□ -1.91
PHC3Q8NDX5 AC011406.1-201ENST00000512440 370 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 SNORD116-25-201ENST00000516517 92 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.15□□□□□ -1.91
PHC3Q8NDX5 LARP7P3-201ENST00000579888 337 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 MIR2681-201ENST00000581814 105 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 DNAJC19P2-201ENST00000593340 302 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 U6.73-201ENST00000619194 103 ntBASIC3.15□□□□□ -1.91
PHC3Q8NDX5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PHC3Q8NDX5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PHC3Q8NDX5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PHC3Q8NDX5 MIR340-201ENST00000362125 95 ntBASIC3.14□□□□□ -1.91
PHC3Q8NDX5 Y_RNA.99-201ENST00000363138 105 ntBASIC3.14□□□□□ -1.91
PHC3Q8NDX5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PHC3Q8NDX5 RNU6-643P-201ENST00000384018 107 ntBASIC3.14□□□□□ -1.91
PHC3Q8NDX5 Y_RNA.497-201ENST00000384447 98 ntBASIC3.14□□□□□ -1.91
PHC3Q8NDX5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.14□□□□□ -1.91
PHC3Q8NDX5 RNA5SP217-201ENST00000515959 91 ntBASIC3.14□□□□□ -1.91
PHC3Q8NDX5 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
PHC3Q8NDX5 AL161756.2-201ENST00000604597 246 ntBASIC3.14□□□□□ -1.91
PHC3Q8NDX5 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
PHC3Q8NDX5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.14□□□□□ -1.91
PHC3Q8NDX5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PHC3Q8NDX5 snoU2-30.2-201ENST00000362805 70 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 SNORA38.1-201ENST00000364172 131 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 SNORD113-1-201ENST00000365321 69 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 SNORA79-201ENST00000408376 140 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 RN7SKP101-201ENST00000411376 320 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 RPS15AP28-201ENST00000435088 386 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 AC023449.1-201ENST00000454464 154 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 NDUFA5P6-201ENST00000542110 379 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 AC091895.1-201ENST00000624494 256 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 MIR3651-201ENST00000630427 90 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 AC073346.2-201ENST00000624724 2058 ntBASIC3.13□□□□□ -1.91
PHC3Q8NDX5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.13□□□□□ -1.91
PHC3Q8NDX5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
PHC3Q8NDX5 RNU6-199P-201ENST00000362954 107 ntBASIC3.12□□□□□ -1.91
PHC3Q8NDX5 MIR548I2-201ENST00000408348 149 ntBASIC3.12□□□□□ -1.91
PHC3Q8NDX5 RPS4XP11-201ENST00000446897 772 ntBASIC3.12□□□□□ -1.91
PHC3Q8NDX5 UQCRHP3-201ENST00000451503 251 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 238.5 ms