Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.21□□□□□ -2.06
VPS52Q8N1B4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.105-201ENST00000363182 111 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 RNU6-770P-201ENST00000363929 105 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 SNORA40.19-201ENST00000390846 128 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 snosnR66.1-201ENST00000391095 99 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 AC019129.1-201ENST00000403786 261 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 RNU6-121P-201ENST00000410525 99 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 RNU6-57P-201ENST00000411348 103 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS52Q8N1B4 AL353689.1-201ENST00000438895 199 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 AL731563.1-201ENST00000442202 214 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS52Q8N1B4 MTATP8P1-201ENST00000467115 207 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 RNU2-12P-201ENST00000517216 168 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.2□□□□□ -2.06
VPS52Q8N1B4 MIR3684-201ENST00000579779 74 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 MIR4300-201ENST00000581016 96 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 AC022441.3-201ENST00000605737 136 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 AC005828.6-201ENST00000606610 232 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 AC004467.1-201ENST00000615678 330 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 AC130454.1-201ENST00000622948 401 ntBASIC2.2□□□□□ -2.06
VPS52Q8N1B4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.101-201ENST00000363154 102 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 RNU6-937P-201ENST00000384325 106 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 MIR583-201ENST00000384846 75 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 HMGN2P39-201ENST00000398005 273 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 AL512604.1-201ENST00000404812 257 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 AC016909.1-201ENST00000415916 166 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 CYCSP49-201ENST00000420810 319 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 AC008134.1-201ENST00000420943 193 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 LINC01399-202ENST00000458450 244 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 SNORA40.15-201ENST00000516884 107 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 MIR3169-201ENST00000578032 83 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 MIR6845-201ENST00000613182 61 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS52Q8N1B4 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
VPS52Q8N1B4 RNU1-58P-201ENST00000362413 163 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.26-201ENST00000362539 101 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 RNA5SP493-201ENST00000364115 91 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.243-201ENST00000364481 109 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 RNU6-1175P-201ENST00000365200 107 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.361-201ENST00000365515 120 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 MIR1283-2-201ENST00000408621 87 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 RNU2-54P-201ENST00000410299 190 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 RNU6-1199P-201ENST00000411249 104 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 AL139156.1-201ENST00000412785 841 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.18□□□□□ -2.06
VPS52Q8N1B4 AL353149.1-201ENST00000610667 244 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 MIR376A1-201ENST00000616574 68 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 AL590240.4-201ENST00000616908 390 ntBASIC2.18□□□□□ -2.06
VPS52Q8N1B4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS52Q8N1B4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.19-201ENST00000362462 99 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 RNU6-806P-201ENST00000365147 105 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 MIR518A2-201ENST00000384966 87 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 AC060773.1-201ENST00000421698 310 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS52Q8N1B4 AC025033.1-201ENST00000463883 194 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 RNU6-966P-201ENST00000516479 104 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 SUMO2P18-201ENST00000518873 252 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 AL162730.1-201ENST00000605734 292 ntBASIC2.17□□□□□ -2.06
VPS52Q8N1B4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS52Q8N1B4 ZNF355P-201ENST00000427301 3216 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 RNU6-1309P-201ENST00000363305 108 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 SNORD115-30-201ENST00000364117 82 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 SNORA72.2-201ENST00000365028 127 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.446-201ENST00000384178 104 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.574-201ENST00000384766 95 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.581-201ENST00000391017 97 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 RNU2-20P-201ENST00000410425 191 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 RPL23AP7-203ENST00000449021 469 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 SUMO1P2-201ENST00000452524 304 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 MTCO2P24-201ENST00000515611 426 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 RNY3P15-201ENST00000516297 97 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 RNU6-635P-201ENST00000516651 102 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS52Q8N1B4 AC002984.1-201ENST00000591692 448 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 AC127459.3-201ENST00000624328 466 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 U6.115-201ENST00000636045 103 ntBASIC2.16□□□□□ -2.06
VPS52Q8N1B4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
VPS52Q8N1B4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
VPS52Q8N1B4 Y_RNA.64-201ENST00000362845 102 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 RNA5SP465-201ENST00000391195 109 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 SNORA40.18-201ENST00000391200 128 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS52Q8N1B4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS52Q8N1B4 BX510359.4-201ENST00000423750 193 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 MTCYBP9-201ENST00000431021 303 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 MTND3P2-201ENST00000438452 342 ntBASIC2.15□□□□□ -2.07
VPS52Q8N1B4 DYNLT3P2-201ENST00000442517 295 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms