Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHPFQ8IZ52 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CHPFQ8IZ52 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHPFQ8IZ52 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.48□□□□□ -2.01
CHPFQ8IZ52 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHPFQ8IZ52 RNA5SP276-201ENST00000362580 94 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 Y_RNA.84-201ENST00000363011 104 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 snoU2_19.2-201ENST00000363024 80 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 RNU6-454P-201ENST00000364292 107 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 Y_RNA.288-201ENST00000364854 92 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 Y_RNA.401-201ENST00000383965 117 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 RNU6-417P-201ENST00000384712 107 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 MIR515-2-201ENST00000384883 83 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 MIR515-1-201ENST00000384884 83 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 MT-TW-201ENST00000387382 68 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 RN7SKP192-201ENST00000411291 327 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 AL158823.1-201ENST00000418441 478 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.48□□□□□ -2.01
CHPFQ8IZ52 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.48□□□□□ -2.01
CHPFQ8IZ52 AC099677.2-201ENST00000436385 175 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 SUMO1P2-201ENST00000452524 304 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHPFQ8IZ52 RNVU1-2-201ENST00000516326 135 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 AC006380.1-201ENST00000603598 186 ntBASIC2.48□□□□□ -2.01
CHPFQ8IZ52 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.48□□□□□ -2.01
CHPFQ8IZ52 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHPFQ8IZ52 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHPFQ8IZ52 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CHPFQ8IZ52 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CHPFQ8IZ52 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHPFQ8IZ52 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHPFQ8IZ52 MIR6073-201ENST00000352083 89 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 RNU4-90P-201ENST00000362773 141 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 Y_RNA.101-201ENST00000363154 102 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 Y_RNA.287-201ENST00000364853 94 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 Y_RNA.331-201ENST00000365267 102 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 RNU6-472P-201ENST00000384299 107 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 Y_RNA.483-201ENST00000384380 101 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 RNU6-505P-201ENST00000384427 107 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 Y_RNA.581-201ENST00000391017 97 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 U3.40-201ENST00000408706 208 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 CR769767.1-201ENST00000436337 346 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 AL137100.2-201ENST00000555786 315 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 MIR5094-201ENST00000578766 85 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 AC008749.1-201ENST00000597650 306 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 AC069114.2-201ENST00000604699 304 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 AC022441.3-201ENST00000605737 136 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 U6.115-201ENST00000636045 103 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.47□□□□□ -2.01
CHPFQ8IZ52 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CHPFQ8IZ52 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHPFQ8IZ52 RNU6-102P-201ENST00000384485 104 ntBASIC2.46□□□□□ -2.02
CHPFQ8IZ52 RNA5SP212-201ENST00000391223 107 ntBASIC2.46□□□□□ -2.02
CHPFQ8IZ52 RNU6-1203P-201ENST00000410703 110 ntBASIC2.46□□□□□ -2.02
CHPFQ8IZ52 AL356379.1-201ENST00000414105 126 ntBASIC2.46□□□□□ -2.02
CHPFQ8IZ52 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.46□□□□□ -2.02
CHPFQ8IZ52 AC005042.3-201ENST00000453230 174 ntBASIC2.46□□□□□ -2.02
CHPFQ8IZ52 RNU6-496P-201ENST00000516145 99 ntBASIC2.46□□□□□ -2.02
CHPFQ8IZ52 RNU6-155P-201ENST00000516347 100 ntBASIC2.46□□□□□ -2.02
CHPFQ8IZ52 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.46□□□□□ -2.02
CHPFQ8IZ52 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHPFQ8IZ52 SNORD81.1-201ENST00000363064 77 ntBASIC2.45□□□□□ -2.02
CHPFQ8IZ52 Y_RNA.243-201ENST00000364481 109 ntBASIC2.45□□□□□ -2.02
CHPFQ8IZ52 Y_RNA.286-201ENST00000364813 102 ntBASIC2.45□□□□□ -2.02
CHPFQ8IZ52 Y_RNA.446-201ENST00000384178 104 ntBASIC2.45□□□□□ -2.02
CHPFQ8IZ52 RPL23AP3-201ENST00000453844 468 ntBASIC2.45□□□□□ -2.02
CHPFQ8IZ52 HSPE1P25-201ENST00000455484 251 ntBASIC2.45□□□□□ -2.02
CHPFQ8IZ52 RPS29P21-201ENST00000496272 170 ntBASIC2.45□□□□□ -2.02
CHPFQ8IZ52 AC046143.2-201ENST00000609789 160 ntBASIC2.45□□□□□ -2.02
CHPFQ8IZ52 RNU6-271P-201ENST00000363858 105 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 RNU6-1019P-201ENST00000364424 107 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 RNU6-290P-201ENST00000365212 101 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 SNORA20B-201ENST00000384220 132 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 Y_RNA.541-201ENST00000384640 113 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 RNU2-54P-201ENST00000410299 190 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AL356320.1-201ENST00000429616 163 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AC018634.1-201ENST00000437554 401 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.44□□□□□ -2.02
CHPFQ8IZ52 HMGB3P17-201ENST00000504195 649 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 Y_RNA.668-201ENST00000516233 93 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 RNA5SP281-201ENST00000516504 135 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 SNORA31.11-201ENST00000516528 139 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 RNU2-12P-201ENST00000517216 168 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.44□□□□□ -2.02
CHPFQ8IZ52 SUB1P4-201ENST00000566062 339 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AC103810.6-201ENST00000606708 136 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AC062037.2-201ENST00000610137 73 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AL627230.6-201ENST00000611129 280 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 MIR1291-201ENST00000627649 87 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 CENPCP1-201ENST00000533085 2578 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 AC010615.1-201ENST00000594254 1764 ntBASIC2.44□□□□□ -2.02
CHPFQ8IZ52 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CHPFQ8IZ52 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CHPFQ8IZ52 AL391987.6-201ENST00000305671 199 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms