Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MIR1289-1-201ENST00000408836 144 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 AL121914.1-201ENST00000450188 156 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 CYP2C59P-201ENST00000457790 269 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 AL049873.1-201ENST00000480540 376 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 SCARNA13-201ENST00000516672 275 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 MIR4431-201ENST00000579990 94 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 AP003357.1-201ENST00000604497 148 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 AC005972.2-201ENST00000604690 348 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 AP001485.1-201ENST00000604799 199 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 SNORA5B-201ENST00000363786 132 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 Y_RNA.215-201ENST00000364204 112 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 MIR95-201ENST00000385072 81 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 AL606845.1-201ENST00000404881 255 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 AL135786.1-201ENST00000415892 214 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 AL139132.1-201ENST00000431587 344 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 MTCO1P44-201ENST00000441935 243 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 RPL23AP54-201ENST00000495129 419 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 AC005840.1-201ENST00000498412 377 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 AL159152.1-201ENST00000635019 2587 ntBASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TRIM48Q8IWZ4 AC096644.4-201ENST00000563417 2912 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 Y_RNA.488-201ENST00000384403 102 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 Y_RNA.497-201ENST00000384447 98 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 MIR1278-201ENST00000408753 81 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 RNU2-48P-201ENST00000410694 191 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 AC006461.1-201ENST00000412637 326 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 AC008134.1-201ENST00000420943 193 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 RPL23AP58-201ENST00000440453 469 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 AC093259.1-201ENST00000509755 300 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 RNA5SP367-201ENST00000516557 118 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 Y_RNA.778-201ENST00000620203 90 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 MIR3658-201ENST00000636291 56 ntBASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM48Q8IWZ4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 SNORA80A-201ENST00000363922 136 ntBASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 Y_RNA.343-201ENST00000365354 112 ntBASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 SNORD50.2-201ENST00000365465 70 ntBASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 RNU6-1323P-201ENST00000384025 107 ntBASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 MIR548I2-201ENST00000408348 149 ntBASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 RNU2-63P-201ENST00000410792 194 ntBASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 AC015720.1-201ENST00000565251 277 ntBASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 AC127455.1-201ENST00000565496 145 ntBASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 FAM35CP-201ENST00000554755 2470 ntBASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM48Q8IWZ4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 MIR340-201ENST00000362125 95 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 RNU4-13P-201ENST00000364019 141 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 MIR15B-201ENST00000385045 98 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 AC123900.1-201ENST00000420390 96 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 AC087499.2-201ENST00000432861 149 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 RNU6-426P-201ENST00000516464 97 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 SNORA48.11-201ENST00000517015 89 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 AC007536.1-201ENST00000533382 349 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 MIR3117-201ENST00000584034 78 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 MIR4438-201ENST00000585271 93 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 ELOCP29-201ENST00000588193 334 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 AL356280.1-201ENST00000603614 379 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 AL391903.3-201ENST00000612158 163 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 AC091895.1-201ENST00000624494 256 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 MIR6733-201ENST00000635723 61 ntBASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
TRIM48Q8IWZ4 RNU6-461P-201ENST00000364195 107 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 RNA5SP125-201ENST00000364843 120 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 RNU4-11P-201ENST00000365287 132 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 RNU6-117P-201ENST00000365415 107 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 AL162725.1-201ENST00000435405 301 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 AL135938.1-201ENST00000443141 297 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 AP004217.1-201ENST00000480579 346 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 AC107027.2-201ENST00000512197 115 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 AC091826.1-201ENST00000514065 313 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 SNORA4.4-201ENST00000515921 135 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 RN7SKP43-201ENST00000516173 320 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 RNU7-121P-201ENST00000516604 62 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 RNU6-667P-201ENST00000517186 102 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 AL031274.2-201ENST00000599419 203 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms