Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 MIR548H3-201ENST00000408771 118 ntBASIC2.73□□□□□ -1.97
RNF180Q86T96 SNORA11.4-201ENST00000408823 129 ntBASIC2.73□□□□□ -1.97
RNF180Q86T96 HMGN2P35-201ENST00000412164 270 ntBASIC2.73□□□□□ -1.97
RNF180Q86T96 RPL39P38-201ENST00000467018 153 ntBASIC2.73□□□□□ -1.97
RNF180Q86T96 SERF1AP1-201ENST00000514575 187 ntBASIC2.73□□□□□ -1.97
RNF180Q86T96 RNU6-436P-201ENST00000516171 114 ntBASIC2.73□□□□□ -1.97
RNF180Q86T96 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.73□□□□□ -1.97
RNF180Q86T96 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.73□□□□□ -1.97
RNF180Q86T96 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF180Q86T96 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF180Q86T96 SNORD114-6-201ENST00000364393 72 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 RNU6-1164P-201ENST00000364428 107 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 RNU6-407P-201ENST00000365280 104 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 Y_RNA.476-201ENST00000384347 108 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 AC016909.1-201ENST00000415916 166 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 AC060773.1-201ENST00000421698 310 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 MRPS10P1-201ENST00000448483 130 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 RPS27P22-201ENST00000478056 241 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF180Q86T96 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF180Q86T96 AC012433.1-201ENST00000588916 398 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 AL512605.2-201ENST00000592972 256 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 AC078899.2-201ENST00000595282 212 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 AC103810.6-201ENST00000606708 136 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.15-201ENST00000611544 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.16-201ENST00000613119 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.12-201ENST00000613778 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.20-201ENST00000613956 192 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.9-201ENST00000615427 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.11-201ENST00000616345 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.2-201ENST00000616535 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.3-201ENST00000617785 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.19-201ENST00000618602 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 RNU2-1-201ENST00000618664 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.6-201ENST00000619225 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.5-201ENST00000619465 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 U2.10-201ENST00000620268 191 ntBASIC2.72□□□□□ -1.97
RNF180Q86T96 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF180Q86T96 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RNF180Q86T96 SNORA27.1-201ENST00000362604 124 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 Y_RNA.489-201ENST00000384410 101 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 RNU6-482P-201ENST00000391068 107 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 AL355796.1-201ENST00000406706 323 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 HMGN2P3-201ENST00000433603 273 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 HMGN2P5-201ENST00000436882 273 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 RPS12P2-201ENST00000439728 269 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 RPL23AP7-203ENST00000449021 469 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.71□□□□□ -1.98
RNF180Q86T96 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 RNU6-1041P-201ENST00000516254 102 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 RNU6-966P-201ENST00000516479 104 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 SCARNA24.2-201ENST00000516968 130 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 AC027419.1-201ENST00000522976 328 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 AC005786.1-201ENST00000588553 154 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 DEFB117-201ENST00000602356 141 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 AC046143.2-201ENST00000609789 160 ntBASIC2.71□□□□□ -1.98
RNF180Q86T96 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RNF180Q86T96 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.71□□□□□ -1.98
RNF180Q86T96 SNORD114-1-201ENST00000362705 72 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 Y_RNA.361-201ENST00000365515 120 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 HMGN2P39-201ENST00000398005 273 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.7□□□□□ -1.98
RNF180Q86T96 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.7□□□□□ -1.98
RNF180Q86T96 CR769767.1-201ENST00000436337 346 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
RNF180Q86T96 MTND1P19-201ENST00000511780 315 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 RNA5SP20-201ENST00000515976 84 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 Y_RNA.680-201ENST00000516441 93 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 RNU1-104P-201ENST00000517280 175 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 MIR4529-201ENST00000578110 78 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 MIR5092-201ENST00000583139 88 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 MIR6873-201ENST00000622788 63 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 MIR1291-201ENST00000627649 87 ntBASIC2.7□□□□□ -1.98
RNF180Q86T96 Y_RNA.478-201ENST00000384358 107 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 MIR518A2-201ENST00000384966 87 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 MIR764-201ENST00000390811 85 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 RNA5SP210-201ENST00000391034 120 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 RNU11-3P-201ENST00000391111 133 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 RNU2-61P-201ENST00000411069 191 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 AC018634.1-201ENST00000437554 401 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 HSPE1P13-201ENST00000451143 297 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 RPS26P55-201ENST00000471178 356 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF180Q86T96 RNU6-1278P-201ENST00000516130 107 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 RNU6-1023P-201ENST00000516137 106 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 MIR3169-201ENST00000578032 83 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 MIR3128-201ENST00000581957 66 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 MIR5194-201ENST00000582634 120 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 MIR4438-201ENST00000585271 93 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 AC007229.1-201ENST00000590455 412 ntBASIC2.69□□□□□ -1.98
RNF180Q86T96 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RNF180Q86T96 RNU4-80P-201ENST00000363200 141 ntBASIC2.68□□□□□ -1.98
RNF180Q86T96 RNU6-379P-201ENST00000363813 104 ntBASIC2.68□□□□□ -1.98
RNF180Q86T96 Y_RNA.352-201ENST00000365439 102 ntBASIC2.68□□□□□ -1.98
RNF180Q86T96 RNU6-417P-201ENST00000384712 107 ntBASIC2.68□□□□□ -1.98
RNF180Q86T96 BX510359.4-201ENST00000423750 193 ntBASIC2.68□□□□□ -1.98
RNF180Q86T96 CST2P1-201ENST00000425770 87 ntBASIC2.68□□□□□ -1.98
RNF180Q86T96 MTCO1P5-201ENST00000433573 344 ntBASIC2.68□□□□□ -1.98
RNF180Q86T96 AC026436.1-201ENST00000510537 270 ntBASIC2.68□□□□□ -1.98
RNF180Q86T96 AP005660.1-201ENST00000522972 293 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms