Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 U3.8-201ENST00000363675 217 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 AP002088.1-201ENST00000382740 395 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 RNU6-144P-201ENST00000383951 107 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 SNORA75.5-201ENST00000391291 81 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 AL512604.1-201ENST00000404812 257 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 MIR1278-201ENST00000408753 81 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 RNU4-43P-201ENST00000410628 137 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 AC016925.1-201ENST00000458303 298 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 RNU1-143P-201ENST00000516296 146 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 AC027176.1-201ENST00000560204 514 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 U1.23-201ENST00000610293 146 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 uc_338.14-201ENST00000613162 166 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 RNU1-68P-201ENST00000615382 146 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 U1.39-201ENST00000621562 146 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 CENPCP1-201ENST00000533085 2578 ntBASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNKSR3Q6P9H4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 FAM35CP-201ENST00000554755 2470 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 MIR367-201ENST00000362299 68 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 RNU6-859P-201ENST00000362728 107 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 Y_RNA.124-201ENST00000363339 93 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 MIR9-1-201ENST00000385198 89 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 MIR1261-201ENST00000408659 82 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 AC010401.1-201ENST00000463867 348 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 AC117454.1-201ENST00000491120 168 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 MIR4679-2-201ENST00000578358 77 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 AL031274.2-201ENST00000599419 203 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 RNU6-91P-201ENST00000607774 107 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 RMST_8.1-201ENST00000610287 165 ntBASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.11□□□□□ -1.91
CNKSR3Q6P9H4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 SNORA25.7-201ENST00000364375 127 ntBASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 RNU6-1336P-201ENST00000383886 109 ntBASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 SNORA40.5-201ENST00000391061 128 ntBASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 RNU7-115P-201ENST00000516433 55 ntBASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 AC120024.3-201ENST00000603167 156 ntBASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 MIR548AY-201ENST00000617669 107 ntBASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 MIR3914-2-201ENST00000637339 95 ntBASIC3.1□□□□□ -1.91
CNKSR3Q6P9H4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 SNORD45.3-201ENST00000363836 72 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 SNORA22-201ENST00000383907 134 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 SNORA36B-201ENST00000410438 131 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 Y_RNA.622-201ENST00000411091 108 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 HSPE1P21-201ENST00000438283 308 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 SNRPGP8-201ENST00000454064 226 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 TRBV12-1-201ENST00000479785 344 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 AC092185.1-201ENST00000491371 97 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 MTND5P34-201ENST00000568888 325 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 AC004832.5-201ENST00000608677 401 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 AC068647.2-201ENST00000637380 353 ntBASIC3.09□□□□□ -1.91
CNKSR3Q6P9H4 AC092435.3-201ENST00000565538 3654 ntBASIC3.09□□□□□ -1.92
CNKSR3Q6P9H4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CNKSR3Q6P9H4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 RNA5SP432-201ENST00000362480 116 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 RNU6-597P-201ENST00000365620 102 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 RNU6-147P-201ENST00000383983 107 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 SNORA12-201ENST00000391162 147 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 AL138827.1-201ENST00000402666 306 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 AL513328.1-201ENST00000446460 224 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 RPS3P1-201ENST00000456781 192 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 RNU6-772P-201ENST00000516042 105 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 SNORA70.12-201ENST00000516084 153 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 MIR7515-201ENST00000637837 67 ntBASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.08□□□□□ -1.92
CNKSR3Q6P9H4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 SNORD114-19-201ENST00000363072 75 ntBASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 RNY3P5-201ENST00000384127 102 ntBASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 SNORD116-13-201ENST00000384408 92 ntBASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 MIR184-201ENST00000384962 84 ntBASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 AL121890.1-201ENST00000435457 205 ntBASIC3.07□□□□□ -1.92
CNKSR3Q6P9H4 AL357134.1-201ENST00000445848 426 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms