Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC027514.1-201ENST00000588561 1603 ntBASIC1.14□□□□□ -2.23
ATL3Q6DD88 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.13□□□□□ -2.23
ATL3Q6DD88 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
ATL3Q6DD88 MRPL42P3-201ENST00000401492 326 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 Y_RNA.594-201ENST00000410373 140 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 RNU6-1186P-201ENST00000410429 97 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.13□□□□□ -2.23
ATL3Q6DD88 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.13□□□□□ -2.23
ATL3Q6DD88 AC010598.1-201ENST00000510378 103 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.13□□□□□ -2.23
ATL3Q6DD88 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 Y_RNA.706-201ENST00000516933 99 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 AC093023.1-201ENST00000547375 507 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.13□□□□□ -2.23
ATL3Q6DD88 AL512310.8-201ENST00000550183 120 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.13□□□□□ -2.23
ATL3Q6DD88 AC006435.5-201ENST00000624486 112 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 AC099654.5-201ENST00000636479 350 ntBASIC1.13□□□□□ -2.23
ATL3Q6DD88 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ATL3Q6DD88 Y_RNA.796-201ENST00000364268 102 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 RNU6-593P-201ENST00000364716 112 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 Y_RNA.799-201ENST00000364992 102 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 Y_RNA.557-201ENST00000384680 107 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 MIR613-201ENST00000385248 95 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 AL355796.1-201ENST00000406706 323 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 RN7SKP200-201ENST00000410564 320 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.12□□□□□ -2.23
ATL3Q6DD88 AC074085.1-201ENST00000413598 418 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 USP9YP16-201ENST00000430287 407 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 MTND1P4-201ENST00000435196 415 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.12□□□□□ -2.23
ATL3Q6DD88 USP9YP23-201ENST00000455085 407 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 RNU6-1016P-201ENST00000516689 94 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 SUMO2P16-201ENST00000519475 264 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.12□□□□□ -2.23
ATL3Q6DD88 CYP3A52P-201ENST00000563326 91 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 MIR3664-201ENST00000579074 99 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 AL357075.2-201ENST00000614906 189 ntBASIC1.12□□□□□ -2.23
ATL3Q6DD88 Y_RNA.184-201ENST00000363884 108 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 Y_RNA.364-201ENST00000365532 101 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 MIR548F5-201ENST00000408421 86 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 RNU6-1001P-201ENST00000411265 100 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 FCF1P9-201ENST00000412546 282 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.11□□□□□ -2.23
ATL3Q6DD88 PGBD4P5-201ENST00000445958 426 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 U8.22-201ENST00000459141 133 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 RNU7-34P-201ENST00000459394 64 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 AC046134.1-201ENST00000514454 666 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 CYCSP23-201ENST00000519781 313 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.11□□□□□ -2.23
ATL3Q6DD88 AC068790.6-201ENST00000602558 258 ntBASIC1.11□□□□□ -2.23
ATL3Q6DD88 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
ATL3Q6DD88 MIR410-201ENST00000362222 80 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 RNY1P16-201ENST00000363063 111 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 Y_RNA.404-201ENST00000383978 102 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 SNORA20B-201ENST00000384220 132 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 Y_RNA.482-201ENST00000384377 111 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
ATL3Q6DD88 AC245047.3-201ENST00000429428 127 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 RPS3AP52-201ENST00000435639 297 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 MRPS10P1-201ENST00000448483 130 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 AC010469.2-201ENST00000496412 480 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 MIR4438-201ENST00000585271 93 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 AC060780.3-201ENST00000589464 80 ntBASIC1.1□□□□□ -2.23
ATL3Q6DD88 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.1□□□□□ -2.23
ATL3Q6DD88 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.1□□□□□ -2.23
ATL3Q6DD88 AC018630.2-201ENST00000534866 2403 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
ATL3Q6DD88 Y_RNA.2-201ENST00000362330 96 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 RNU6-1266P-201ENST00000362794 105 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 Y_RNA.72-201ENST00000362894 103 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 RNA5SP259-201ENST00000365541 109 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.09□□□□□ -2.23
ATL3Q6DD88 RNU7-94P-201ENST00000459576 63 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 RPL39P38-201ENST00000467018 153 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 AC116353.2-201ENST00000505332 712 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 APOOP3-201ENST00000536787 586 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 AC023157.2-201ENST00000540596 141 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 AC009229.3-201ENST00000608056 282 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 AC084782.3-201ENST00000612282 578 ntBASIC1.09□□□□□ -2.23
ATL3Q6DD88 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
ATL3Q6DD88 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ATL3Q6DD88 RNA5SP327-201ENST00000362494 101 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 Y_RNA.88-201ENST00000363029 99 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 RNU1-22P-201ENST00000363334 158 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 RNU6-318P-201ENST00000384283 103 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 MTCO3P19-201ENST00000415864 321 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.08□□□□□ -2.24
ATL3Q6DD88 MTCYBP10-201ENST00000424905 650 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 MTND3P10-201ENST00000450967 341 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.08□□□□□ -2.24
ATL3Q6DD88 PCNPP5-201ENST00000452246 481 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 AC018710.1-201ENST00000506509 158 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 AC074133.1-201ENST00000515696 183 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 RNU6-107P-201ENST00000516643 102 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 RN7SKP88-201ENST00000516847 250 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 Y_RNA.708-201ENST00000516950 96 ntBASIC1.08□□□□□ -2.24
ATL3Q6DD88 RNU6-165P-201ENST00000517170 99 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms