Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AP001328.1-201ENST00000528550 176 ntBASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 RPL23AP91-201ENST00000569211 455 ntBASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 AP001340.1-201ENST00000624405 217 ntBASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC138915.1-201ENST00000565427 1685 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 MIR340-201ENST00000362125 95 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 MIR208A-201ENST00000362287 71 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 SNORD56.3-201ENST00000363507 71 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.203-201ENST00000364106 102 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNA5SP387-201ENST00000364226 106 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.333-201ENST00000365274 102 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.353-201ENST00000365440 108 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 SNORD21-201ENST00000383953 95 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-484P-201ENST00000384016 107 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-80P-201ENST00000384195 107 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 SNORA7.4-201ENST00000384249 137 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 MIR1253-201ENST00000408273 105 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC060773.1-201ENST00000421698 310 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC245102.2-201ENST00000448956 180 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 CYP2C59P-201ENST00000457790 269 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 SNORA4.4-201ENST00000515921 135 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU4-57P-201ENST00000515980 135 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-197P-201ENST00000516680 100 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 UBL5P2-201ENST00000583788 219 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 U2.20-201ENST00000613956 192 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 AL035425.3-201ENST00000564206 4996 ntBASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-915P-201ENST00000364943 103 ntBASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 SNORA70.4-201ENST00000365509 134 ntBASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-597P-201ENST00000365620 102 ntBASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-1080P-201ENST00000383982 107 ntBASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.432-201ENST00000384087 111 ntBASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 AP001486.1-201ENST00000463339 476 ntBASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-1299P-201ENST00000516316 100 ntBASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC011604.1-201ENST00000545978 196 ntBASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 MIR3651-201ENST00000630427 90 ntBASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DQA1Q5Y7H0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-805P-201ENST00000365643 106 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNA5SP274-201ENST00000410484 108 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU2-55P-201ENST00000411146 174 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC022018.1-201ENST00000430685 241 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 snoU13.22-201ENST00000459428 104 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-856P-201ENST00000516959 98 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 RN7SKP57-201ENST00000517248 293 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC090142.3-201ENST00000519012 385 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 AL355297.2-201ENST00000604792 129 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 YPEL5P2-201ENST00000605553 359 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 uc_338.4-201ENST00000616635 176 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 U6.73-201ENST00000619194 103 ntBASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC110774.1-201ENST00000623567 2018 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-1209P-201ENST00000363655 107 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU6-978P-201ENST00000364371 103 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 SNORA71.1-201ENST00000364523 117 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.273-201ENST00000364703 102 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.294-201ENST00000364916 102 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.525-201ENST00000384570 113 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 SNORA11.1-201ENST00000408133 129 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC244505.4-201ENST00000434905 287 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 HMGN2P34-201ENST00000437647 269 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 SSXP5-201ENST00000443473 287 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU1-143P-201ENST00000516296 146 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 SNORA48.11-201ENST00000517015 89 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 SCARNA20.6-201ENST00000517251 106 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 AL356280.1-201ENST00000603614 379 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 U1.23-201ENST00000610293 146 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 AL162274.2-201ENST00000614406 332 ntBASIC2.86□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU1-68P-201ENST00000615382 146 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms