Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 Y_RNA.358-201ENST00000365491 99 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 SNORA20B-201ENST00000384220 132 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 MT-TL1-201ENST00000386347 75 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 RNU6-440P-201ENST00000390882 105 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 RNU6-700P-201ENST00000391043 107 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 AP1B1P2-201ENST00000416196 106 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 MTCYBP10-201ENST00000424905 650 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 MTND1P2-201ENST00000430604 821 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.04□□□□□ -2.24
RFX4Q33E94 AC010469.2-201ENST00000496412 480 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 APOOP3-201ENST00000536787 586 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 RAB11AP2-201ENST00000545905 639 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 AC004584.2-201ENST00000570407 410 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 MIR1244-1-201ENST00000612829 85 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 AL157834.3-201ENST00000615543 103 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 AL353770.2-201ENST00000620024 78 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 MIR1244-3-201ENST00000635744 85 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 MIR1244-2-201ENST00000636449 85 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 MIR1244-4-202ENST00000636813 85 ntBASIC1.04□□□□□ -2.24
RFX4Q33E94 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
RFX4Q33E94 RNU6-1123P-201ENST00000362347 106 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 SNORD33-201ENST00000362761 85 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 Y_RNA.166-201ENST00000363730 102 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 RNU6-879P-201ENST00000364328 108 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 RNU6-1264P-201ENST00000383891 107 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 MRPL42P3-201ENST00000401492 326 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 Y_RNA.595-201ENST00000410403 105 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 AC092423.1-201ENST00000430165 186 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.03□□□□□ -2.24
RFX4Q33E94 UQCRBP2-201ENST00000447827 297 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 RPS27P22-201ENST00000478056 241 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 AL163540.1-201ENST00000485382 386 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 AC010598.1-201ENST00000510378 103 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 SUMO2P16-201ENST00000519475 264 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.03□□□□□ -2.24
RFX4Q33E94 AC040896.1-201ENST00000613819 479 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 U6atac.1-201ENST00000616025 117 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 AL669831.3-213ENST00000636676 183 ntBASIC1.03□□□□□ -2.24
RFX4Q33E94 RNU1-22P-201ENST00000363334 158 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 RNU6-454P-201ENST00000364292 107 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 RNU6-99P-201ENST00000364721 107 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 SNORD81.2-201ENST00000365153 76 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 RNA5SP259-201ENST00000365541 109 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 RNU6-950P-201ENST00000384651 107 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 RNU6-876P-201ENST00000391295 104 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 FGF7P8-201ENST00000402994 292 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 AL133373.1-201ENST00000497098 94 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 AC097462.1-201ENST00000514125 324 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 AC022868.1-201ENST00000517767 391 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 AL512310.8-201ENST00000550183 120 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 AC018448.1-201ENST00000552843 316 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RFX4Q33E94 CYP3A52P-201ENST00000563326 91 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
RFX4Q33E94 AC016727.1-205ENST00000605437 569 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 AC104260.1-201ENST00000616660 539 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 AC092794.2-201ENST00000620933 563 ntBASIC1.02□□□□□ -2.25
RFX4Q33E94 AC018630.2-201ENST00000534866 2403 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 AL391987.6-201ENST00000305671 199 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 RNA5SP327-201ENST00000362494 101 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 RN7SKP200-201ENST00000410564 320 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 Y_RNA.646-201ENST00000410980 101 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 RNU6-1304P-201ENST00000411374 106 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.01□□□□□ -2.25
RFX4Q33E94 RPL17P19-201ENST00000489069 552 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 RN7SKP49-201ENST00000516675 260 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 MIR3124-201ENST00000582636 67 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 AL021879.1-201ENST00000611756 288 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 PISRT1.1-201ENST00000616930 107 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 AC022306.2-201ENST00000617563 647 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 AC006435.5-201ENST00000624486 112 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 AC099654.5-201ENST00000636479 350 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 TPTEP1-208ENST00000636884 213 ntBASIC1.01□□□□□ -2.25
RFX4Q33E94 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
RFX4Q33E94 AC073544.1-201ENST00000600110 1595 ntBASIC1□□□□□ -2.25
RFX4Q33E94 MIR410-201ENST00000362222 80 ntBASIC1□□□□□ -2.25
RFX4Q33E94 RNU6-1301P-201ENST00000362724 104 ntBASIC1□□□□□ -2.25
RFX4Q33E94 AC018865.2-201ENST00000423631 129 ntBASIC1□□□□□ -2.25
RFX4Q33E94 RAB28P5-201ENST00000427490 651 ntBASIC1□□□□□ -2.25
RFX4Q33E94 AC092473.1-201ENST00000441098 221 ntBASIC1□□□□□ -2.25
RFX4Q33E94 PGBD4P5-201ENST00000445958 426 ntBASIC1□□□□□ -2.25
RFX4Q33E94 PCNPP5-201ENST00000452246 481 ntBASIC1□□□□□ -2.25
RFX4Q33E94 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1□□□□□ -2.25
RFX4Q33E94 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1□□□□□ -2.25
RFX4Q33E94 AC093852.1-201ENST00000503587 266 ntBASIC1□□□□□ -2.25
RFX4Q33E94 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1□□□□□ -2.25
RFX4Q33E94 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1□□□□□ -2.25
RFX4Q33E94 SNORA40.9-201ENST00000515895 93 ntBASIC1□□□□□ -2.25
RFX4Q33E94 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1□□□□□ -2.25
RFX4Q33E94 CYCSP23-201ENST00000519781 313 ntBASIC1□□□□□ -2.25
RFX4Q33E94 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1□□□□□ -2.25
RFX4Q33E94 MIR6078-201ENST00000611069 100 ntBASIC1□□□□□ -2.25
RFX4Q33E94 AC087588.2-201ENST00000617667 426 ntBASIC1□□□□□ -2.25
RFX4Q33E94 MIR6079-201ENST00000635807 62 ntBASIC1□□□□□ -2.25
RFX4Q33E94 U6.115-201ENST00000636045 103 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms