Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SNORA54-201ENST00000384281 123 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 SNORA12-201ENST00000391162 147 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 MRPL35P3-201ENST00000421557 364 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 AL161651.1-201ENST00000440882 223 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 RNU6-221P-201ENST00000459541 99 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 AC107626.1-201ENST00000471084 183 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 MRPS17P9-201ENST00000511924 393 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 AC022523.2-201ENST00000561045 150 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 RNA5SP189-201ENST00000364920 115 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 Y_RNA.531-201ENST00000384589 121 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 MIR548A2-201ENST00000384956 97 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 U8.17-201ENST00000391292 132 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 RNU4-47P-201ENST00000410876 114 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 SNRPGP10-201ENST00000432323 225 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 RNU7-164P-201ENST00000459221 62 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 RPS26P15-201ENST00000488067 348 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 NDUFA4P2-201ENST00000489989 244 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 AC011604.1-201ENST00000545978 196 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 AC091152.3-201ENST00000604227 325 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 AC006435.5-201ENST00000624486 112 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 AC007656.2-201ENST00000624902 4547 ntBASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RSPO4Q2I0M5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 Y_RNA.454-201ENST00000384224 113 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 RNU6-750P-201ENST00000390946 107 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 Y_RNA.620-201ENST00000411009 88 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 VDAC1P3-201ENST00000434069 851 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 RNU2-11P-201ENST00000459191 187 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 RNU7-123P-201ENST00000515911 60 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 RNA5SP356-201ENST00000515972 94 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 RNU6-693P-201ENST00000516134 107 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 MIR4694-201ENST00000578534 80 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 MIR548Z-201ENST00000584743 97 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 RNU6-91P-201ENST00000607774 107 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 MIR3199-2-201ENST00000636243 86 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 AC026241.1-201ENST00000517873 2142 ntBASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RSPO4Q2I0M5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 RNU6-832P-201ENST00000363319 107 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 Y_RNA.507-201ENST00000384500 99 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 MIR577-201ENST00000385196 96 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 MIR708-201ENST00000390708 88 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 MIR1283-1-201ENST00000408494 87 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 SNRPGP3-201ENST00000469405 227 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 AC113410.1-201ENST00000505029 247 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 Y_RNA.666-201ENST00000516187 112 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 RNU6-1098P-201ENST00000516772 96 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 AC068657.1-201ENST00000520807 306 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 MIR4668-201ENST00000582284 70 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 AP003355.3-201ENST00000623465 114 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 AC006160.2-201ENST00000637708 154 ntBASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.37□□□□□ -1.87
RSPO4Q2I0M5 LINC02471-203ENST00000641941 4752 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 AC017071.1-201ENST00000564407 2204 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 SNORA31-201ENST00000362607 130 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 Y_RNA.96-201ENST00000363092 109 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 RNU6-60P-201ENST00000364792 103 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 SNORD38C-201ENST00000384381 69 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 RNU6-748P-201ENST00000384648 107 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 RNA5SP104-201ENST00000410989 118 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 RNU6-57P-201ENST00000411348 103 ntBASIC3.36□□□□□ -1.87
RSPO4Q2I0M5 TRBV12-1-201ENST00000479785 344 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms