Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.32□□□□□ -1.88
SOX4Q06945 NDUFA5P6-201ENST00000542110 379 ntBASIC3.32□□□□□ -1.88
SOX4Q06945 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.32□□□□□ -1.88
SOX4Q06945 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.32□□□□□ -1.88
SOX4Q06945 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.32□□□□□ -1.88
SOX4Q06945 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SOX4Q06945 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
SOX4Q06945 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SOX4Q06945 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SOX4Q06945 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
SOX4Q06945 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SOX4Q06945 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SOX4Q06945 AC073325.2-201ENST00000339545 159 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 RNU1-105P-201ENST00000363470 161 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 RNU6-1164P-201ENST00000364428 107 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 RPL30P4-201ENST00000429309 333 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.31□□□□□ -1.88
SOX4Q06945 AP001486.1-201ENST00000463339 476 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 RPS26P45-201ENST00000471748 340 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 SNORA72.7-201ENST00000516349 94 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 RNU6-711P-201ENST00000517255 106 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.31□□□□□ -1.88
SOX4Q06945 AC097639.2-201ENST00000603159 172 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 AC013412.1-201ENST00000610687 192 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 AL121890.5-201ENST00000620848 304 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 AC073476.4-201ENST00000628409 72 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 AC009487.4-201ENST00000624969 3585 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 PWAR6-201ENST00000552334 4618 ntBASIC3.31□□□□□ -1.88
SOX4Q06945 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
SOX4Q06945 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
SOX4Q06945 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
SOX4Q06945 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.3□□□□□ -1.88
SOX4Q06945 RNU6-1240P-201ENST00000365155 104 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 RNU6-1235P-201ENST00000384559 107 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 AC016909.1-201ENST00000415916 166 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 AC008134.1-201ENST00000420943 193 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 AC245102.2-201ENST00000448956 180 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 RNU6-498P-201ENST00000459468 107 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 AL049873.1-201ENST00000480540 376 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 RNU6-781P-201ENST00000516377 101 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 AC105245.1-201ENST00000581934 244 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 AC091178.2-201ENST00000584401 117 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 AC006254.2-201ENST00000603259 279 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.3□□□□□ -1.88
SOX4Q06945 SNORA50A-202ENST00000629536 136 ntBASIC3.3□□□□□ -1.88
SOX4Q06945 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.3□□□□□ -1.88
SOX4Q06945 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SOX4Q06945 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SOX4Q06945 MIR22-201ENST00000362190 85 ntBASIC3.29□□□□□ -1.88
SOX4Q06945 SNORA71.1-201ENST00000364523 117 ntBASIC3.29□□□□□ -1.88
SOX4Q06945 SNORA26-201ENST00000391286 122 ntBASIC3.29□□□□□ -1.88
SOX4Q06945 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.29□□□□□ -1.88
SOX4Q06945 RPS12P18-201ENST00000442381 270 ntBASIC3.29□□□□□ -1.88
SOX4Q06945 RPS4XP11-201ENST00000446897 772 ntBASIC3.29□□□□□ -1.88
SOX4Q06945 SNORD11-201ENST00000459124 84 ntBASIC3.29□□□□□ -1.88
SOX4Q06945 Y_RNA.651-201ENST00000459380 103 ntBASIC3.29□□□□□ -1.88
SOX4Q06945 AC006386.2-201ENST00000624491 75 ntBASIC3.29□□□□□ -1.88
SOX4Q06945 AC012005.1-201ENST00000624575 75 ntBASIC3.29□□□□□ -1.88
SOX4Q06945 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SOX4Q06945 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SOX4Q06945 AC008555.8-201ENST00000623602 2168 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SOX4Q06945 RNU6-1209P-201ENST00000363655 107 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 Y_RNA.796-201ENST00000364268 102 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 Y_RNA.799-201ENST00000364992 102 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 RNU6-438P-201ENST00000365561 103 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SOX4Q06945 RNA5SP354-201ENST00000391247 136 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 RNU6-1077P-201ENST00000410506 102 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 AC063976.3-201ENST00000426849 329 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 RN7SKP19-201ENST00000516016 252 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 SNORA18.4-201ENST00000516440 124 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 MIR3117-201ENST00000584034 78 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 Pinc.1-201ENST00000616452 154 ntBASIC3.28□□□□□ -1.88
SOX4Q06945 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SOX4Q06945 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.28□□□□□ -1.88
SOX4Q06945 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SOX4Q06945 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SOX4Q06945 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SOX4Q06945 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SOX4Q06945 RNU6-486P-201ENST00000363116 107 ntBASIC3.27□□□□□ -1.89
SOX4Q06945 Y_RNA.111-201ENST00000363248 100 ntBASIC3.27□□□□□ -1.89
SOX4Q06945 RNU1-22P-201ENST00000363334 158 ntBASIC3.27□□□□□ -1.89
SOX4Q06945 MIR548A1-201ENST00000385041 97 ntBASIC3.27□□□□□ -1.89
SOX4Q06945 AC009414.1-201ENST00000427200 443 ntBASIC3.27□□□□□ -1.89
SOX4Q06945 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.27□□□□□ -1.89
SOX4Q06945 RNU7-149P-201ENST00000516739 59 ntBASIC3.27□□□□□ -1.89
SOX4Q06945 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SOX4Q06945 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SOX4Q06945 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SOX4Q06945 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SOX4Q06945 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SOX4Q06945 Y_RNA.52-201ENST00000362760 96 ntBASIC3.26□□□□□ -1.89
SOX4Q06945 SNORA80A-201ENST00000363922 136 ntBASIC3.26□□□□□ -1.89
SOX4Q06945 Y_RNA.346-201ENST00000365385 112 ntBASIC3.26□□□□□ -1.89
SOX4Q06945 RNU6-1083P-201ENST00000384022 107 ntBASIC3.26□□□□□ -1.89
SOX4Q06945 U6atac.2-201ENST00000408644 118 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms