| RAP1A | P62834 | AC010598.1-201 | ENST00000510378 | 103 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC096721.1-201 | ENST00000513540 | 552 nt | TSL 4 BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC097462.1-201 | ENST00000514125 | 324 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | Y_RNA.691-201 | ENST00000516611 | 103 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-107P-201 | ENST00000516643 | 102 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-165P-201 | ENST00000517170 | 99 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | APOOP3-201 | ENST00000536787 | 586 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC040896.1-201 | ENST00000613819 | 479 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MIR6715A-201 | ENST00000615929 | 79 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC006435.5-201 | ENST00000624486 | 112 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC018630.2-201 | ENST00000534866 | 2403 nt | BASIC | 0.95 | □□□□□ -2.26 | | |
| RAP1A | P62834 | ANKRD30BP1-201 | ENST00000451052 | 2186 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNA5SP327-201 | ENST00000362494 | 101 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-845P-201 | ENST00000362578 | 103 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | SNORD33-201 | ENST00000362761 | 85 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | Y_RNA.358-201 | ENST00000365491 | 99 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNA5SP259-201 | ENST00000365541 | 109 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | DEFB134-201 | ENST00000382205 | 314 nt | APPRIS P1 TSL 1 (best) BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-1264P-201 | ENST00000383891 | 107 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-767P-201 | ENST00000384132 | 107 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-700P-201 | ENST00000391043 | 107 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | Y_RNA.595-201 | ENST00000410403 | 105 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | Y_RNA.619-201 | ENST00000410951 | 90 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | PGBD4P5-201 | ENST00000445958 | 426 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC022445.1-201 | ENST00000457499 | 408 nt | TSL 3 BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU7-87P-201 | ENST00000459343 | 62 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC087343.1-201 | ENST00000477341 | 475 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC097501.2-201 | ENST00000502668 | 305 nt | TSL 5 BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | SEMA6A-AS1-204 | ENST00000510682 | 521 nt | TSL 5 BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AL359757.2-201 | ENST00000624309 | 274 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | CTDSPL2-202 | ENST00000558373 | 4255 nt | TSL 1 (best) BASIC | 0.94 | □□□□□ -2.26 | | |
| RAP1A | P62834 | Y_RNA.160-201 | ENST00000363677 | 92 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | Y_RNA.166-201 | ENST00000363730 | 102 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MT-TL1-201 | ENST00000386347 | 75 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | SNORA75.4-201 | ENST00000391278 | 119 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RN7SKP200-201 | ENST00000410564 | 320 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MTND1P2-201 | ENST00000430604 | 821 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | UQCRBP2-201 | ENST00000447827 | 297 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC092991.1-201 | ENST00000477176 | 376 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RPS27P22-201 | ENST00000478056 | 241 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AL133373.1-201 | ENST00000497098 | 94 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RN7SKP49-201 | ENST00000516675 | 260 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AP003128.1-201 | ENST00000531414 | 448 nt | TSL 2 BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC018448.1-201 | ENST00000552843 | 316 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MIR3664-201 | ENST00000579074 | 99 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC090371.2-202 | ENST00000582239 | 644 nt | TSL 5 BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC091178.2-201 | ENST00000584401 | 117 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC005828.6-201 | ENST00000606610 | 232 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC103810.9-201 | ENST00000606688 | 112 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AL021879.1-201 | ENST00000611756 | 288 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC092794.1-201 | ENST00000612734 | 582 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MIR1244-1-201 | ENST00000612829 | 85 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC104260.1-201 | ENST00000616660 | 539 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC092794.2-201 | ENST00000620933 | 563 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MIR1244-3-201 | ENST00000635744 | 85 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MIR6079-201 | ENST00000635807 | 62 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MIR1244-2-201 | ENST00000636449 | 85 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AL669831.3-213 | ENST00000636676 | 183 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MIR1244-4-202 | ENST00000636813 | 85 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | FAM135A-203 | ENST00000370479 | 5930 nt | TSL 1 (best) BASIC | 0.93 | □□□□□ -2.26 | | |
| RAP1A | P62834 | SNORA27.1-201 | ENST00000362604 | 124 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-1301P-201 | ENST00000362724 | 104 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-879P-201 | ENST00000364328 | 108 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | SNORD81.2-201 | ENST00000365153 | 76 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-505P-201 | ENST00000384427 | 107 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-950P-201 | ENST00000384651 | 107 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MTCO3P19-201 | ENST00000415864 | 321 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC018865.2-201 | ENST00000423631 | 129 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | SNX2P2-201 | ENST00000424553 | 323 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC092423.1-201 | ENST00000430165 | 186 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AL163540.1-201 | ENST00000485382 | 386 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC008243.1-201 | ENST00000504955 | 389 nt | TSL 3 BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC074133.1-201 | ENST00000515696 | 183 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | SNORA40.9-201 | ENST00000515895 | 93 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC022868.1-201 | ENST00000517767 | 391 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC090124.1-201 | ENST00000525097 | 448 nt | TSL 3 BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AL049869.2-201 | ENST00000556634 | 365 nt | TSL 2 BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC022596.1-201 | ENST00000582895 | 302 nt | TSL 5 BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC032019.2-201 | ENST00000584916 | 403 nt | TSL 5 BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | HSPE1P19-201 | ENST00000603327 | 295 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC016727.1-205 | ENST00000605437 | 569 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | SNORD114-21-201 | ENST00000606412 | 72 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC087588.2-201 | ENST00000617667 | 426 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | U6.115-201 | ENST00000636045 | 103 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | MCMDC2-207 | ENST00000492775 | 1831 nt | TSL 1 (best) BASIC | 0.92 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC073544.1-201 | ENST00000600110 | 1595 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | GNPDA2-204 | ENST00000509756 | 5382 nt | APPRIS ALT1 TSL 1 (best) BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | ZNF518A-210 | ENST00000624776 | 7994 nt | APPRIS P1 TSL 1 (best) BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | Y_RNA.124-201 | ENST00000363339 | 93 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-99P-201 | ENST00000364721 | 107 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RNU6-117P-201 | ENST00000365415 | 107 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | Y_RNA.474-201 | ENST00000384341 | 102 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | TRAJ47-201 | ENST00000390490 | 57 nt | APPRIS P1 BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | FGF7P8-201 | ENST00000402994 | 292 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | Y_RNA.646-201 | ENST00000410980 | 101 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RPL23AP36-201 | ENST00000413895 | 458 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | AC006159.2-201 | ENST00000421965 | 692 nt | TSL 2 BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | RAB28P5-201 | ENST00000427490 | 651 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | DYNLT3P2-201 | ENST00000442517 | 295 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| RAP1A | P62834 | STAG3L5P-204 | ENST00000443759 | 179 nt | BASIC | 0.91 | □□□□□ -2.26 | | |