Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RNU6-383P-201ENST00000410864 94 ntBASIC3.17□□□□□ -1.9
RTP1P59025 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
RTP1P59025 HSPE1P21-201ENST00000438283 308 ntBASIC3.17□□□□□ -1.9
RTP1P59025 RNA5SP24-201ENST00000516478 95 ntBASIC3.17□□□□□ -1.9
RTP1P59025 RNU5F-4P-201ENST00000516581 114 ntBASIC3.17□□□□□ -1.9
RTP1P59025 AC112693.2-201ENST00000556538 232 ntBASIC3.17□□□□□ -1.9
RTP1P59025 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.17□□□□□ -1.9
RTP1P59025 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.17□□□□□ -1.9
RTP1P59025 RPL30P11-203ENST00000598995 310 ntBASIC3.17□□□□□ -1.9
RTP1P59025 AC090115.4-201ENST00000609970 188 ntBASIC3.17□□□□□ -1.9
RTP1P59025 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.17□□□□□ -1.9
RTP1P59025 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RTP1P59025 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RTP1P59025 SNORD114-7-201ENST00000362520 77 ntBASIC3.16□□□□□ -1.9
RTP1P59025 Y_RNA.420-201ENST00000384043 110 ntBASIC3.16□□□□□ -1.9
RTP1P59025 RNU6-1228P-201ENST00000391014 107 ntBASIC3.16□□□□□ -1.9
RTP1P59025 RNU1-101P-201ENST00000391171 127 ntBASIC3.16□□□□□ -1.9
RTP1P59025 RNA5SP344-201ENST00000411081 104 ntBASIC3.16□□□□□ -1.9
RTP1P59025 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.16□□□□□ -1.9
RTP1P59025 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.16□□□□□ -1.9
RTP1P59025 RPL23AP7-203ENST00000449021 469 ntBASIC3.16□□□□□ -1.9
RTP1P59025 RNU7-197P-201ENST00000458836 62 ntBASIC3.16□□□□□ -1.9
RTP1P59025 AC114982.1-201ENST00000469402 321 ntBASIC3.16□□□□□ -1.9
RTP1P59025 AC117454.1-201ENST00000491120 168 ntBASIC3.16□□□□□ -1.9
RTP1P59025 RNU6-1333P-201ENST00000516162 93 ntBASIC3.16□□□□□ -1.9
RTP1P59025 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.16□□□□□ -1.9
RTP1P59025 SNORD53-201ENST00000579969 78 ntBASIC3.16□□□□□ -1.9
RTP1P59025 AC008739.2-201ENST00000597006 317 ntBASIC3.16□□□□□ -1.9
RTP1P59025 AL670379.2-201ENST00000604983 252 ntBASIC3.16□□□□□ -1.9
RTP1P59025 MIR6817-201ENST00000615588 66 ntBASIC3.16□□□□□ -1.9
RTP1P59025 AC064859.1-201ENST00000624741 174 ntBASIC3.16□□□□□ -1.9
RTP1P59025 AC068647.2-201ENST00000637380 353 ntBASIC3.16□□□□□ -1.9
RTP1P59025 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.16□□□□□ -1.9
RTP1P59025 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RTP1P59025 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RTP1P59025 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
RTP1P59025 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.15□□□□□ -1.9
RTP1P59025 MIR367-201ENST00000362299 68 ntBASIC3.15□□□□□ -1.91
RTP1P59025 RNA5SP68-201ENST00000363885 119 ntBASIC3.15□□□□□ -1.91
RTP1P59025 SNORA20B-201ENST00000384220 132 ntBASIC3.15□□□□□ -1.91
RTP1P59025 MIR9-1-201ENST00000385198 89 ntBASIC3.15□□□□□ -1.91
RTP1P59025 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RTP1P59025 AL138827.1-201ENST00000402666 306 ntBASIC3.15□□□□□ -1.91
RTP1P59025 AC003685.2-201ENST00000422795 395 ntBASIC3.15□□□□□ -1.91
RTP1P59025 RNU6-1211P-201ENST00000459179 105 ntBASIC3.15□□□□□ -1.91
RTP1P59025 MIR449C-201ENST00000516047 92 ntBASIC3.15□□□□□ -1.91
RTP1P59025 RNU7-115P-201ENST00000516433 55 ntBASIC3.15□□□□□ -1.91
RTP1P59025 RNU6-1337P-201ENST00000516525 95 ntBASIC3.15□□□□□ -1.91
RTP1P59025 RNU6-1234P-201ENST00000516877 103 ntBASIC3.15□□□□□ -1.91
RTP1P59025 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.15□□□□□ -1.91
RTP1P59025 MIR548AY-201ENST00000617669 107 ntBASIC3.15□□□□□ -1.91
RTP1P59025 AC092435.3-201ENST00000565538 3654 ntBASIC3.15□□□□□ -1.91
RTP1P59025 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTP1P59025 AL159152.1-201ENST00000635019 2587 ntBASIC3.14□□□□□ -1.91
RTP1P59025 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTP1P59025 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTP1P59025 U8.2-201ENST00000363156 134 ntBASIC3.14□□□□□ -1.91
RTP1P59025 RNU1-112P-201ENST00000364401 164 ntBASIC3.14□□□□□ -1.91
RTP1P59025 RNU6-215P-201ENST00000365169 102 ntBASIC3.14□□□□□ -1.91
RTP1P59025 Y_RNA.353-201ENST00000365440 108 ntBASIC3.14□□□□□ -1.91
RTP1P59025 SNORD116-14-201ENST00000383894 92 ntBASIC3.14□□□□□ -1.91
RTP1P59025 SNORD116-17-201ENST00000383929 92 ntBASIC3.14□□□□□ -1.91
RTP1P59025 SNORD116-13-201ENST00000384408 92 ntBASIC3.14□□□□□ -1.91
RTP1P59025 SNORD116-15-201ENST00000384445 92 ntBASIC3.14□□□□□ -1.91
RTP1P59025 SNORD116-19-201ENST00000384729 92 ntBASIC3.14□□□□□ -1.91
RTP1P59025 MIR29B2-201ENST00000385055 81 ntBASIC3.14□□□□□ -1.91
RTP1P59025 SNORD37.2-201ENST00000391075 66 ntBASIC3.14□□□□□ -1.91
RTP1P59025 MIR873-201ENST00000401120 77 ntBASIC3.14□□□□□ -1.91
RTP1P59025 MIR1283-1-201ENST00000408494 87 ntBASIC3.14□□□□□ -1.91
RTP1P59025 SNORA36B-201ENST00000410438 131 ntBASIC3.14□□□□□ -1.91
RTP1P59025 AL513477.1-202ENST00000417061 214 ntBASIC3.14□□□□□ -1.91
RTP1P59025 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.14□□□□□ -1.91
RTP1P59025 RNU7-57P-201ENST00000459540 60 ntBASIC3.14□□□□□ -1.91
RTP1P59025 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.14□□□□□ -1.91
RTP1P59025 ZNF702P-202ENST00000434269 1966 ntBASIC3.14□□□□□ -1.91
RTP1P59025 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTP1P59025 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTP1P59025 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTP1P59025 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RTP1P59025 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTP1P59025 Y_RNA.273-201ENST00000364703 102 ntBASIC3.13□□□□□ -1.91
RTP1P59025 SNORD14D-201ENST00000384390 87 ntBASIC3.13□□□□□ -1.91
RTP1P59025 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
RTP1P59025 RPL23AP58-201ENST00000440453 469 ntBASIC3.13□□□□□ -1.91
RTP1P59025 HSPE1P13-201ENST00000451143 297 ntBASIC3.13□□□□□ -1.91
RTP1P59025 RNU7-14P-201ENST00000459331 62 ntBASIC3.13□□□□□ -1.91
RTP1P59025 RNA5SP148-201ENST00000516527 94 ntBASIC3.13□□□□□ -1.91
RTP1P59025 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.13□□□□□ -1.91
RTP1P59025 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.13□□□□□ -1.91
RTP1P59025 AC103810.1-201ENST00000579873 453 ntBASIC3.13□□□□□ -1.91
RTP1P59025 AL359881.1-201ENST00000602916 267 ntBASIC3.13□□□□□ -1.91
RTP1P59025 AP003357.1-201ENST00000604497 148 ntBASIC3.13□□□□□ -1.91
RTP1P59025 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.13□□□□□ -1.91
RTP1P59025 AC090517.3-201ENST00000625170 141 ntBASIC3.13□□□□□ -1.91
RTP1P59025 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.13□□□□□ -1.91
RTP1P59025 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTP1P59025 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTP1P59025 FAM35CP-201ENST00000554755 2470 ntBASIC3.12□□□□□ -1.91
RTP1P59025 SNORA27.1-201ENST00000362604 124 ntBASIC3.12□□□□□ -1.91
RTP1P59025 RNU6-728P-201ENST00000365375 104 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms