Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL159152.1-201ENST00000635019 2587 ntBASIC1.54□□□□□ -2.16
HMGCS2P54868 MTND4P29-201ENST00000503122 1372 ntBASIC1.54□□□□□ -2.16
HMGCS2P54868 RNU5F-3P-201ENST00000363767 117 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 Y_RNA.197-201ENST00000364004 102 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 RNU6-879P-201ENST00000364328 108 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 Y_RNA.252-201ENST00000364556 101 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 Y_RNA.314-201ENST00000365114 102 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 Y_RNA.395-201ENST00000383945 109 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 RNU6-203P-201ENST00000384038 104 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 RNY1P14-201ENST00000384426 108 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 SNORA48.1-201ENST00000390879 135 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 MIR1185-2-201ENST00000408687 86 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 AC009310.1-201ENST00000414414 451 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 MTND4P28-201ENST00000426217 387 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGCS2P54868 AC099799.1-201ENST00000439809 192 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 AC112492.4-201ENST00000456549 352 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 RNU7-169P-201ENST00000459456 61 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 RNU7-4P-201ENST00000516961 62 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGCS2P54868 AC136443.5-201ENST00000603741 370 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 snoZ196.1-201ENST00000625269 89 ntBASIC1.53□□□□□ -2.16
HMGCS2P54868 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMGCS2P54868 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGCS2P54868 RNU6-708P-201ENST00000384217 107 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 AL137792.2-201ENST00000443484 235 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 UBE2V1P7-201ENST00000446395 340 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 Y_RNA.639-201ENST00000458981 102 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 RNU6-221P-201ENST00000459541 99 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 AC114982.1-201ENST00000469402 321 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGCS2P54868 MIR2355-201ENST00000517199 87 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 AC025647.1-201ENST00000517879 253 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 AP002001.1-203ENST00000534002 267 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 AC005786.1-201ENST00000588553 154 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 AC103810.8-201ENST00000607347 118 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 AC083806.3-201ENST00000614016 455 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 uc_338.22-201ENST00000622722 187 ntBASIC1.52□□□□□ -2.17
HMGCS2P54868 MIR369-201ENST00000362155 70 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 RNU6-797P-201ENST00000363101 109 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 Y_RNA.112-201ENST00000363250 102 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 Y_RNA.428-201ENST00000384078 102 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HMGCS2P54868 RPL21P1-201ENST00000399532 476 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 RNU6-57P-201ENST00000411348 103 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 PCNPP5-201ENST00000452246 481 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 AC011406.1-201ENST00000512440 370 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 RNU6-976P-201ENST00000516086 111 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 RNU6-1041P-201ENST00000516254 102 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 RNU4-77P-201ENST00000516692 156 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 SNORD116.3-201ENST00000517176 78 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 AC144568.1-201ENST00000520139 137 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 AL442163.3-201ENST00000554110 156 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 SUB1P4-201ENST00000566062 339 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGCS2P54868 MIR4272-201ENST00000635924 64 ntBASIC1.51□□□□□ -2.17
HMGCS2P54868 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGCS2P54868 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMGCS2P54868 RNU6-862P-201ENST00000362804 105 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 MIR30A-201ENST00000385092 71 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 SNORD12B-201ENST00000410433 91 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 RNA5SP100-201ENST00000410903 110 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 RNA5SP59-201ENST00000410922 110 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGCS2P54868 ATP5J2P3-201ENST00000451550 258 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 RPL26P26-201ENST00000480251 434 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 SNORA40.9-201ENST00000515895 93 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.5□□□□□ -2.17
HMGCS2P54868 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 AC092447.9-201ENST00000603395 144 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 SNORD58B-201ENST00000607313 66 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 AL353149.1-201ENST00000610667 244 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 U2.1-201ENST00000618978 145 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 AL160413.1-201ENST00000622780 310 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 MIR338-201ENST00000636369 67 ntBASIC1.5□□□□□ -2.17
HMGCS2P54868 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.5□□□□□ -2.17
HMGCS2P54868 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
HMGCS2P54868 Y_RNA.31-201ENST00000362574 102 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 Y_RNA.80-201ENST00000362996 102 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 Y_RNA.287-201ENST00000364853 94 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 RNU1-115P-201ENST00000365329 160 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 Y_RNA.431-201ENST00000384086 102 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 RNU6-474P-201ENST00000384243 107 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 Y_RNA.485-201ENST00000384395 102 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 RNY3P4-201ENST00000384428 101 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 Y_RNA.605-201ENST00000410577 105 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 HMGN2P34-201ENST00000437647 269 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 COX6CP14-201ENST00000469580 174 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 AC010469.2-201ENST00000496412 480 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 AC074133.1-201ENST00000515696 183 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 Y_RNA.661-201ENST00000516003 99 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms