Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SHMT2P34897 RNU6-1264P-201ENST00000383891 107 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 RNU6-440P-201ENST00000390882 105 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 RNU6-700P-201ENST00000391043 107 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 AL355796.1-201ENST00000406706 323 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 RN7SKP200-201ENST00000410564 320 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 PGBD4P5-201ENST00000445958 426 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 AC107399.1-201ENST00000451226 265 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.07□□□□□ -2.24
SHMT2P34897 U8.22-201ENST00000459141 133 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 RPS27P22-201ENST00000478056 241 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 RPL7P42-201ENST00000481005 679 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 AC010469.2-201ENST00000496412 480 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 AC018710.1-201ENST00000506509 158 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 AC097462.1-201ENST00000514125 324 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 AC027419.1-201ENST00000522976 328 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.07□□□□□ -2.24
SHMT2P34897 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
SHMT2P34897 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.07□□□□□ -2.24
SHMT2P34897 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.07□□□□□ -2.24
SHMT2P34897 AC018630.2-201ENST00000534866 2403 ntBASIC1.07□□□□□ -2.24
SHMT2P34897 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
SHMT2P34897 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 Y_RNA.404-201ENST00000383978 102 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 RNU6-1145P-201ENST00000384246 107 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 Y_RNA.482-201ENST00000384377 111 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 MTCYBP10-201ENST00000424905 650 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 UQCRBP2-201ENST00000447827 297 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 MTND3P10-201ENST00000450967 341 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.06□□□□□ -2.24
SHMT2P34897 HMGN1P7-201ENST00000491722 313 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.06□□□□□ -2.24
SHMT2P34897 AC010598.1-201ENST00000510378 103 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 SUMO2P16-201ENST00000519475 264 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 RAB11AP2-201ENST00000545905 639 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.06□□□□□ -2.24
SHMT2P34897 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.06□□□□□ -2.24
SHMT2P34897 SNORA20B-201ENST00000384220 132 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 Y_RNA.557-201ENST00000384680 107 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 RNU6-192P-201ENST00000391253 100 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.05□□□□□ -2.24
SHMT2P34897 RNU7-87P-201ENST00000459343 62 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 RNU7-94P-201ENST00000459576 63 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 AC092991.1-201ENST00000477176 376 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.05□□□□□ -2.24
SHMT2P34897 AC116353.2-201ENST00000505332 712 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 MIR3664-201ENST00000579074 99 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 AC011712.1-201ENST00000588959 234 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 AL513423.1-201ENST00000621695 132 ntBASIC1.05□□□□□ -2.24
SHMT2P34897 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
SHMT2P34897 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
SHMT2P34897 MIR410-201ENST00000362222 80 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 RNU6-505P-201ENST00000384427 107 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SHMT2P34897 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.04□□□□□ -2.24
SHMT2P34897 MTCO3P19-201ENST00000415864 321 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 COX6CP14-201ENST00000469580 174 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 AC074133.1-201ENST00000515696 183 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 SCARNA16.2-201ENST00000516520 172 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 CYCSP23-201ENST00000519781 313 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 AP002001.1-203ENST00000534002 267 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 AC080078.3-201ENST00000605407 463 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 AL021879.1-201ENST00000611756 288 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 AC104260.1-201ENST00000616660 539 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SHMT2P34897 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SHMT2P34897 AC073544.1-201ENST00000600110 1595 ntBASIC1.04□□□□□ -2.24
SHMT2P34897 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SHMT2P34897 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.03□□□□□ -2.24
SHMT2P34897 RNA5SP327-201ENST00000362494 101 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 RNU6-879P-201ENST00000364328 108 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 RNU6-318P-201ENST00000384283 103 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SHMT2P34897 AL034345.1-201ENST00000407768 123 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 AC018865.2-201ENST00000423631 129 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 STAG3L5P-204ENST00000443759 179 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 RPL39P38-201ENST00000467018 153 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.03□□□□□ -2.24
SHMT2P34897 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.03□□□□□ -2.24
SHMT2P34897 RN7SKP49-201ENST00000516675 260 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 RNU7-30P-201ENST00000516835 62 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 RNU7-172P-201ENST00000517125 64 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 RNU6-165P-201ENST00000517170 99 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 AC018448.1-201ENST00000552843 316 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 AC019288.1-201ENST00000557918 224 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 AC080078.2-201ENST00000603766 501 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 AC073349.3-201ENST00000617616 186 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 MIR6079-201ENST00000635807 62 ntBASIC1.03□□□□□ -2.24
SHMT2P34897 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
SHMT2P34897 SNORA27.1-201ENST00000362604 124 ntBASIC1.02□□□□□ -2.25
SHMT2P34897 Y_RNA.164-201ENST00000363709 102 ntBASIC1.02□□□□□ -2.25
SHMT2P34897 Y_RNA.279-201ENST00000364763 95 ntBASIC1.02□□□□□ -2.25
SHMT2P34897 Y_RNA.358-201ENST00000365491 99 ntBASIC1.02□□□□□ -2.25
SHMT2P34897 RNU6-767P-201ENST00000384132 107 ntBASIC1.02□□□□□ -2.25
SHMT2P34897 MIR660-201ENST00000385235 97 ntBASIC1.02□□□□□ -2.25
SHMT2P34897 SNORA75.4-201ENST00000391278 119 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms