Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 HMGN2P34-201ENST00000437647 269 ntBASIC2.89□□□□□ -1.95
HOXC12P31275 RNU7-200P-201ENST00000516105 62 ntBASIC2.89□□□□□ -1.95
HOXC12P31275 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.89□□□□□ -1.95
HOXC12P31275 RNU7-172P-201ENST00000517125 64 ntBASIC2.89□□□□□ -1.95
HOXC12P31275 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC12P31275 AC015720.1-201ENST00000565251 277 ntBASIC2.89□□□□□ -1.95
HOXC12P31275 AC127455.1-201ENST00000565496 145 ntBASIC2.89□□□□□ -1.95
HOXC12P31275 MIR4425-201ENST00000580572 84 ntBASIC2.89□□□□□ -1.95
HOXC12P31275 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.88□□□□□ -1.95
HOXC12P31275 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HOXC12P31275 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HOXC12P31275 RNU1-22P-201ENST00000363334 158 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 RNU6-117P-201ENST00000365415 107 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 MIR616-201ENST00000385293 97 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 MT-TT-201ENST00000387460 66 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 SRIP3-201ENST00000413200 219 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 AC244505.4-201ENST00000434905 287 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 AL162725.1-201ENST00000435405 301 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 SSXP5-201ENST00000443473 287 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.88□□□□□ -1.95
HOXC12P31275 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.88□□□□□ -1.95
HOXC12P31275 MIR4672-201ENST00000583126 81 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 RPL12P50-201ENST00000603116 116 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 MIR7106-201ENST00000612419 65 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 AL449363.1-201ENST00000617815 186 ntBASIC2.88□□□□□ -1.95
HOXC12P31275 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.88□□□□□ -1.95
HOXC12P31275 AC245060.5-201ENST00000610778 3293 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HOXC12P31275 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HOXC12P31275 Y_RNA.229-201ENST00000364347 113 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.87□□□□□ -1.95
HOXC12P31275 SNORD116-18-201ENST00000383961 92 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 RNU6-417P-201ENST00000384712 107 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 EBAG9P1-201ENST00000418955 543 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC12P31275 RPS29P21-201ENST00000496272 170 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 AC011406.1-201ENST00000512440 370 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 AC097462.1-201ENST00000514125 324 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 RNU6-1146P-201ENST00000516282 102 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 AC006023.1-201ENST00000603944 259 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 AC093732.2-201ENST00000607950 274 ntBASIC2.87□□□□□ -1.95
HOXC12P31275 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
HOXC12P31275 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC12P31275 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC12P31275 AL161431.1-201ENST00000618966 4205 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 VTRNA1-1-201ENST00000363120 99 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 SNORA5B-201ENST00000363786 132 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 RNU6-1130P-201ENST00000365434 107 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 RNY1P5-201ENST00000383890 115 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 RNU6-376P-201ENST00000384731 106 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 RNU6-1186P-201ENST00000410429 97 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 RNA5SP344-201ENST00000411081 104 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 SUMO1P4-201ENST00000429430 302 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 AC107083.1-201ENST00000439643 279 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 AC104389.3-201ENST00000445629 235 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 RNU6-437P-201ENST00000459408 95 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 RN7SL499P-201ENST00000481141 276 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 RNU6-1041P-201ENST00000516254 102 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 RNU6-406P-201ENST00000516470 107 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 AC109810.1-201ENST00000534066 224 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 AL033523.1-201ENST00000605153 153 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 U6.73-201ENST00000619194 103 ntBASIC2.86□□□□□ -1.95
HOXC12P31275 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
HOXC12P31275 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC12P31275 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC12P31275 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC12P31275 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
HOXC12P31275 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC12P31275 RNU4-84P-201ENST00000364200 139 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 RNA5SP126-201ENST00000365092 109 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 RNU6-449P-201ENST00000383914 107 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 SNORA44-201ENST00000384584 132 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 Y_RNA.580-201ENST00000391004 95 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 AL606845.1-201ENST00000404881 255 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 AL121914.1-201ENST00000450188 156 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 AC005840.1-201ENST00000498412 377 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 NDUFA5P6-201ENST00000542110 379 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 MIR4431-201ENST00000579990 94 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 MIR3910-1-201ENST00000580936 111 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 AL391903.3-201ENST00000612158 163 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 U4atac.1-201ENST00000618345 95 ntBASIC2.85□□□□□ -1.95
HOXC12P31275 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HOXC12P31275 Y_RNA.99-201ENST00000363138 105 ntBASIC2.84□□□□□ -1.95
HOXC12P31275 SNORD114-6-201ENST00000364393 72 ntBASIC2.84□□□□□ -1.95
HOXC12P31275 RNU6-1072P-201ENST00000384703 107 ntBASIC2.84□□□□□ -1.95
HOXC12P31275 RNU6-443P-201ENST00000384780 107 ntBASIC2.84□□□□□ -1.95
HOXC12P31275 RNU6-1228P-201ENST00000391014 107 ntBASIC2.84□□□□□ -1.95
HOXC12P31275 HMGN1P18-201ENST00000457642 277 ntBASIC2.84□□□□□ -1.95
HOXC12P31275 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.84□□□□□ -1.95
HOXC12P31275 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXC12P31275 AC008264.2-201ENST00000610193 3731 ntBASIC2.84□□□□□ -1.96
HOXC12P31275 AC131280.1-202ENST00000624067 4211 ntBASIC2.84□□□□□ -1.96
HOXC12P31275 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
HOXC12P31275 RNU1-35P-201ENST00000362782 153 ntBASIC2.83□□□□□ -1.96
HOXC12P31275 snoU2-30.2-201ENST00000362805 70 ntBASIC2.83□□□□□ -1.96
HOXC12P31275 RNU4-41P-201ENST00000364426 143 ntBASIC2.83□□□□□ -1.96
HOXC12P31275 SNORA72-201ENST00000384339 132 ntBASIC2.83□□□□□ -1.96
HOXC12P31275 MIR1262-201ENST00000408276 93 ntBASIC2.83□□□□□ -1.96
HOXC12P31275 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms