Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL021879.1-201ENST00000611756 288 ntBASIC1.22□□□□□ -2.21
PTPN6P29350 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.22□□□□□ -2.21
PTPN6P29350 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
PTPN6P29350 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.22□□□□□ -2.21
PTPN6P29350 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
PTPN6P29350 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
PTPN6P29350 RNU6-1264P-201ENST00000383891 107 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 Y_RNA.482-201ENST00000384377 111 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 MIR329-1-201ENST00000385028 80 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 RNU11-5P-201ENST00000391216 129 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 PGBD4P5-201ENST00000445958 426 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 RPL7P42-201ENST00000481005 679 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 AC105029.1-201ENST00000520250 669 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 CYP3A52P-201ENST00000563326 91 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 AC073413.2-201ENST00000604332 360 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 AC084782.3-201ENST00000612282 578 ntBASIC1.21□□□□□ -2.22
PTPN6P29350 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
PTPN6P29350 AC018630.2-201ENST00000534866 2403 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 SNORA70.7-201ENST00000384159 133 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 Y_RNA.557-201ENST00000384680 107 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 AC092423.1-201ENST00000430165 186 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 RPL23AP50-201ENST00000434149 455 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 MTND3P10-201ENST00000450967 341 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.2□□□□□ -2.22
PTPN6P29350 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.2□□□□□ -2.22
PTPN6P29350 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.2□□□□□ -2.22
PTPN6P29350 RNU6-307P-201ENST00000516743 106 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 MIR3684-201ENST00000579779 74 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 AC005899.2-201ENST00000584353 90 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 AL162424.1-201ENST00000602325 221 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 AL390123.1-201ENST00000603216 237 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 AC104260.1-201ENST00000616660 539 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
PTPN6P29350 AC099654.5-201ENST00000636479 350 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 AC073544.1-201ENST00000600110 1595 ntBASIC1.2□□□□□ -2.22
PTPN6P29350 Y_RNA.339-201ENST00000365325 102 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 SNORA20B-201ENST00000384220 132 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 RNU6-1145P-201ENST00000384246 107 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 Y_RNA.498-201ENST00000384460 102 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 RNU6-192P-201ENST00000391253 100 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PTPN6P29350 MTCYBP4-201ENST00000401524 249 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.19□□□□□ -2.22
PTPN6P29350 MTCO3P19-201ENST00000415864 321 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.19□□□□□ -2.22
PTPN6P29350 PCNPP5-201ENST00000452246 481 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.19□□□□□ -2.22
PTPN6P29350 RN7SKP88-201ENST00000516847 250 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 RNU7-172P-201ENST00000517125 64 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 AC022868.1-201ENST00000517767 391 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 RPL21P9-201ENST00000556149 474 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 7SK.8-201ENST00000612110 250 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 7SK.11-201ENST00000615477 250 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 7SK.13-201ENST00000622040 250 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 SNORD3E-202ENST00000627253 216 ntBASIC1.19□□□□□ -2.22
PTPN6P29350 RNU6-874P-201ENST00000362390 105 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 RNA5SP361-201ENST00000362686 118 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 Y_RNA.88-201ENST00000363029 99 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 Y_RNA.358-201ENST00000365491 99 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 ELOCP21-201ENST00000412558 336 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.18□□□□□ -2.22
PTPN6P29350 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.18□□□□□ -2.22
PTPN6P29350 STAG3L5P-204ENST00000443759 179 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 AC097462.1-201ENST00000514125 324 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 AC074133.1-201ENST00000515696 183 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 RNU7-30P-201ENST00000516835 62 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 AL357075.2-201ENST00000614906 189 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 AC073349.3-201ENST00000617616 186 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 AC092794.2-201ENST00000620933 563 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 AL513423.1-201ENST00000621695 132 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 MIR6079-201ENST00000635807 62 ntBASIC1.18□□□□□ -2.22
PTPN6P29350 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
PTPN6P29350 RNU6-407P-201ENST00000365280 104 ntBASIC1.17□□□□□ -2.22
PTPN6P29350 Y_RNA.404-201ENST00000383978 102 ntBASIC1.17□□□□□ -2.22
PTPN6P29350 RNU6-767P-201ENST00000384132 107 ntBASIC1.17□□□□□ -2.22
PTPN6P29350 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PTPN6P29350 AL355796.1-201ENST00000406706 323 ntBASIC1.17□□□□□ -2.22
PTPN6P29350 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
PTPN6P29350 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.17□□□□□ -2.22
PTPN6P29350 AC018448.1-201ENST00000552843 316 ntBASIC1.17□□□□□ -2.22
PTPN6P29350 MIR3664-201ENST00000579074 99 ntBASIC1.17□□□□□ -2.22
PTPN6P29350 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.17□□□□□ -2.22
PTPN6P29350 SNORA28-201ENST00000606769 126 ntBASIC1.17□□□□□ -2.22
PTPN6P29350 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.17□□□□□ -2.22
PTPN6P29350 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PTPN6P29350 RNU1-22P-201ENST00000363334 158 ntBASIC1.16□□□□□ -2.22
PTPN6P29350 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.16□□□□□ -2.22
PTPN6P29350 U8.22-201ENST00000459141 133 ntBASIC1.16□□□□□ -2.22
PTPN6P29350 RPL39P38-201ENST00000467018 153 ntBASIC1.16□□□□□ -2.22
PTPN6P29350 HMGN1P7-201ENST00000491722 313 ntBASIC1.16□□□□□ -2.22
PTPN6P29350 AC116353.2-201ENST00000505332 712 ntBASIC1.16□□□□□ -2.22
PTPN6P29350 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.16□□□□□ -2.22
PTPN6P29350 SCARNA16.2-201ENST00000516520 172 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms