Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL049873.1-201ENST00000480540 376 ntBASIC2.58□□□□□ -2
CD40P25942 RN7SL20P-201ENST00000488827 297 ntBASIC2.58□□□□□ -2
CD40P25942 AC092185.1-201ENST00000491371 97 ntBASIC2.58□□□□□ -2
CD40P25942 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.58□□□□□ -2
CD40P25942 AC021269.2-201ENST00000532318 330 ntBASIC2.58□□□□□ -2
CD40P25942 AC007229.1-201ENST00000590455 412 ntBASIC2.58□□□□□ -2
CD40P25942 AC073413.2-201ENST00000604332 360 ntBASIC2.58□□□□□ -2
CD40P25942 AC072026.1-201ENST00000605023 201 ntBASIC2.58□□□□□ -2
CD40P25942 AL353149.1-201ENST00000610667 244 ntBASIC2.58□□□□□ -2
CD40P25942 Y_RNA.802-201ENST00000614892 130 ntBASIC2.58□□□□□ -2
CD40P25942 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.58□□□□□ -2
CD40P25942 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.57□□□□□ -2
CD40P25942 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.57□□□□□ -2
CD40P25942 SNORA33-201ENST00000363664 130 ntBASIC2.57□□□□□ -2
CD40P25942 RNU6-682P-201ENST00000363843 106 ntBASIC2.57□□□□□ -2
CD40P25942 SNORA80A-201ENST00000363922 136 ntBASIC2.57□□□□□ -2
CD40P25942 RNU6-851P-201ENST00000384565 107 ntBASIC2.57□□□□□ -2
CD40P25942 Y_RNA.572-201ENST00000384757 98 ntBASIC2.57□□□□□ -2
CD40P25942 MIR29C-201ENST00000385231 88 ntBASIC2.57□□□□□ -2
CD40P25942 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.57□□□□□ -2
CD40P25942 BX510359.4-201ENST00000423750 193 ntBASIC2.57□□□□□ -2
CD40P25942 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.57□□□□□ -2
CD40P25942 RPL23AP54-201ENST00000495129 419 ntBASIC2.57□□□□□ -2
CD40P25942 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.57□□□□□ -2
CD40P25942 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.57□□□□□ -2
CD40P25942 SCGB1D5P-201ENST00000515134 247 ntBASIC2.57□□□□□ -2
CD40P25942 RNU7-116P-201ENST00000516940 62 ntBASIC2.57□□□□□ -2
CD40P25942 AC068657.1-201ENST00000520807 306 ntBASIC2.57□□□□□ -2
CD40P25942 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.57□□□□□ -2
CD40P25942 AC127455.1-201ENST00000565496 145 ntBASIC2.57□□□□□ -2
CD40P25942 AC007318.2-201ENST00000620999 243 ntBASIC2.57□□□□□ -2
CD40P25942 SCARNA15.3-201ENST00000626315 122 ntBASIC2.57□□□□□ -2
CD40P25942 SCARNA4.1-201ENST00000628597 123 ntBASIC2.57□□□□□ -2
CD40P25942 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CD40P25942 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CD40P25942 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.56□□□□□ -2
CD40P25942 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.56□□□□□ -2
CD40P25942 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CD40P25942 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CD40P25942 Y_RNA.24-201ENST00000362508 103 ntBASIC2.56□□□□□ -2
CD40P25942 RNU6-862P-201ENST00000362804 105 ntBASIC2.56□□□□□ -2
CD40P25942 Y_RNA.111-201ENST00000363248 100 ntBASIC2.56□□□□□ -2
CD40P25942 RNU1-96P-201ENST00000364163 162 ntBASIC2.56□□□□□ -2
CD40P25942 RNU6-144P-201ENST00000383951 107 ntBASIC2.56□□□□□ -2
CD40P25942 RNU6-886P-201ENST00000384319 105 ntBASIC2.56□□□□□ -2
CD40P25942 MIR626-201ENST00000385032 94 ntBASIC2.56□□□□□ -2
CD40P25942 AL117342.1-201ENST00000404861 406 ntBASIC2.56□□□□□ -2
CD40P25942 AL139132.1-201ENST00000431587 344 ntBASIC2.56□□□□□ -2
CD40P25942 RPS15AP28-201ENST00000435088 386 ntBASIC2.56□□□□□ -2
CD40P25942 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.56□□□□□ -2
CD40P25942 RNU7-128P-201ENST00000517247 62 ntBASIC2.56□□□□□ -2
CD40P25942 MIR7106-201ENST00000612419 65 ntBASIC2.56□□□□□ -2
CD40P25942 AL359075.3-201ENST00000613288 217 ntBASIC2.56□□□□□ -2
CD40P25942 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.56□□□□□ -2
CD40P25942 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.56□□□□□ -2
CD40P25942 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.55□□□□□ -2
CD40P25942 MIR367-201ENST00000362299 68 ntBASIC2.55□□□□□ -2
CD40P25942 Y_RNA.7-201ENST00000362352 102 ntBASIC2.55□□□□□ -2
CD40P25942 RNU1-58P-201ENST00000362413 163 ntBASIC2.55□□□□□ -2
CD40P25942 RNU6-969P-201ENST00000383900 105 ntBASIC2.55□□□□□ -2
CD40P25942 Y_RNA.571-201ENST00000384753 98 ntBASIC2.55□□□□□ -2
CD40P25942 RNA5SP323-201ENST00000391094 133 ntBASIC2.55□□□□□ -2
CD40P25942 RNU2-2P-201ENST00000410396 191 ntBASIC2.55□□□□□ -2
CD40P25942 RNU6-383P-201ENST00000410864 94 ntBASIC2.55□□□□□ -2
CD40P25942 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.55□□□□□ -2
CD40P25942 RPS4XP11-201ENST00000446897 772 ntBASIC2.55□□□□□ -2
CD40P25942 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.55□□□□□ -2
CD40P25942 RNU7-99P-201ENST00000516271 62 ntBASIC2.55□□□□□ -2
CD40P25942 RNA5SP137-201ENST00000516833 135 ntBASIC2.55□□□□□ -2
CD40P25942 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.55□□□□□ -2
CD40P25942 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.55□□□□□ -2
CD40P25942 MIR4724-201ENST00000579485 89 ntBASIC2.55□□□□□ -2
CD40P25942 RNU2-4P-201ENST00000606190 192 ntBASIC2.55□□□□□ -2
CD40P25942 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.55□□□□□ -2
CD40P25942 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD40P25942 AL035425.3-201ENST00000564206 4996 ntBASIC2.54□□□□□ -2
CD40P25942 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
CD40P25942 snoU2_19.4-201ENST00000364329 80 ntBASIC2.54□□□□□ -2
CD40P25942 SNORA9.2-201ENST00000365361 133 ntBASIC2.54□□□□□ -2
CD40P25942 RNU1-109P-201ENST00000383960 147 ntBASIC2.54□□□□□ -2
CD40P25942 Y_RNA.435-201ENST00000384095 112 ntBASIC2.54□□□□□ -2
CD40P25942 RNU4-70P-201ENST00000384579 139 ntBASIC2.54□□□□□ -2
CD40P25942 RNU6-381P-201ENST00000391259 108 ntBASIC2.54□□□□□ -2
CD40P25942 PCNPP3-201ENST00000393579 471 ntBASIC2.54□□□□□ -2
CD40P25942 RN7SKP51-201ENST00000410781 304 ntBASIC2.54□□□□□ -2
CD40P25942 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.54□□□□□ -2
CD40P25942 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.54□□□□□ -2
CD40P25942 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.54□□□□□ -2
CD40P25942 RNU6-1219P-201ENST00000516143 112 ntBASIC2.54□□□□□ -2
CD40P25942 RNU1-142P-201ENST00000516682 145 ntBASIC2.54□□□□□ -2
CD40P25942 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.54□□□□□ -2
CD40P25942 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.54□□□□□ -2
CD40P25942 AP006437.1-201ENST00000641440 3685 ntBASIC2.54□□□□□ -2
CD40P25942 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CD40P25942 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.53□□□□□ -2
CD40P25942 AC096644.4-201ENST00000563417 2912 ntBASIC2.53□□□□□ -2
CD40P25942 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CD40P25942 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
CD40P25942 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CD40P25942 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms