Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNU6-1156P-201ENST00000410365 100 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 RNU4-14P-201ENST00000410858 122 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 Y_RNA.646-201ENST00000410980 101 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 ELOCP21-201ENST00000412558 336 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 MTND4P28-201ENST00000426217 387 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 SNORA40.9-201ENST00000515895 93 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 RNU6-902P-201ENST00000517212 91 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 AL929325.1-201ENST00000603096 117 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 SNORA28-201ENST00000606769 126 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 MIR3674-201ENST00000636576 68 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 AC018630.2-201ENST00000534866 2403 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CAPN3P20807 Y_RNA.259-201ENST00000364619 101 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 RNA5SP190-201ENST00000365222 118 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 MIR513A1-201ENST00000385138 129 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 SNORD12B-201ENST00000410433 91 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 AP1B1P2-201ENST00000416196 106 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.72□□□□□ -2.13
CAPN3P20807 AC005002.2-201ENST00000438228 269 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 RPL30P15-201ENST00000457129 321 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 AC097462.1-201ENST00000514125 324 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 RNU6-1278P-201ENST00000516130 107 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 AC023157.2-201ENST00000540596 141 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 AC005730.3-201ENST00000583067 366 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 AC040896.1-201ENST00000613819 479 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.72□□□□□ -2.13
CAPN3P20807 MIR8054-201ENST00000620877 86 ntBASIC1.72□□□□□ -2.13
CAPN3P20807 RNU6-1301P-201ENST00000362724 104 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 RNU6-457P-201ENST00000363999 107 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 RNU6-203P-201ENST00000384038 104 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 SNORA20B-201ENST00000384220 132 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 RNU6-1031P-201ENST00000384773 107 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 MIR194-1-201ENST00000384892 85 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 SNORA17.3-201ENST00000391159 129 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 MRPL35P1-201ENST00000404272 572 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 Y_RNA.605-201ENST00000410577 105 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 RAB28P5-201ENST00000427490 651 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 AC099799.1-201ENST00000439809 192 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 AC027119.1-201ENST00000440877 241 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.71□□□□□ -2.14
CAPN3P20807 RPS27P1-201ENST00000450552 247 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.71□□□□□ -2.14
CAPN3P20807 RNU7-172P-201ENST00000517125 64 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 AC015688.6-201ENST00000577737 104 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 AC022217.4-201ENST00000604389 163 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 AC095038.3-201ENST00000634439 195 ntBASIC1.71□□□□□ -2.14
CAPN3P20807 MIR302D-201ENST00000362275 68 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 RNU6-890P-201ENST00000384121 107 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 Y_RNA.474-201ENST00000384341 102 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 MIR628-201ENST00000385229 95 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 RNU6-440P-201ENST00000390882 105 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 Y_RNA.592-201ENST00000410274 109 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 SNX2P2-201ENST00000424553 323 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.7□□□□□ -2.14
CAPN3P20807 U8.22-201ENST00000459141 133 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 RNU6-470P-201ENST00000515954 104 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 RNA5SP20-201ENST00000515976 84 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 RNU7-128P-201ENST00000517247 62 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 AC073413.2-201ENST00000604332 360 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 AP001485.1-201ENST00000604799 199 ntBASIC1.7□□□□□ -2.14
CAPN3P20807 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CAPN3P20807 RNU6-407P-201ENST00000365280 104 ntBASIC1.69□□□□□ -2.14
CAPN3P20807 RNU6-318P-201ENST00000384283 103 ntBASIC1.69□□□□□ -2.14
CAPN3P20807 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
CAPN3P20807 MTCO2P27-201ENST00000420740 428 ntBASIC1.69□□□□□ -2.14
CAPN3P20807 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.69□□□□□ -2.14
CAPN3P20807 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.69□□□□□ -2.14
CAPN3P20807 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.69□□□□□ -2.14
CAPN3P20807 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
CAPN3P20807 AL357075.2-201ENST00000614906 189 ntBASIC1.69□□□□□ -2.14
CAPN3P20807 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CAPN3P20807 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CAPN3P20807 SNORD114-7-201ENST00000362520 77 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 SNORA27.1-201ENST00000362604 124 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 RNU6-490P-201ENST00000362985 107 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 RNA5SP259-201ENST00000365541 109 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 RNU6-376P-201ENST00000384731 106 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 MIR873-201ENST00000401120 77 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.68□□□□□ -2.14
CAPN3P20807 AL606517.2-201ENST00000442855 241 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 AC093019.1-201ENST00000443135 252 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 FCF1P4-201ENST00000448326 183 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 AC107393.1-201ENST00000512403 346 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 AC019176.1-201ENST00000518519 225 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.68□□□□□ -2.14
CAPN3P20807 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.68□□□□□ -2.14
CAPN3P20807 AC021506.2-201ENST00000612354 169 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CAPN3P20807 AL513423.1-201ENST00000621695 132 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 MIR6079-201ENST00000635807 62 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 MIR1302-1-201ENST00000637932 143 ntBASIC1.68□□□□□ -2.14
CAPN3P20807 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CAPN3P20807 RNU1-22P-201ENST00000363334 158 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 SNORA72.1-201ENST00000363485 129 ntBASIC1.67□□□□□ -2.14
CAPN3P20807 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms