Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 AC010205.1-201ENST00000616668 449 ntBASIC2.16□□□□□ -2.06
RXRAP19793 U6.92-201ENST00000636464 89 ntBASIC2.16□□□□□ -2.06
RXRAP19793 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RXRAP19793 Y_RNA.47-201ENST00000362697 108 ntBASIC2.15□□□□□ -2.07
RXRAP19793 snoU2-30.2-201ENST00000362805 70 ntBASIC2.15□□□□□ -2.07
RXRAP19793 Y_RNA.176-201ENST00000363815 109 ntBASIC2.15□□□□□ -2.07
RXRAP19793 RNU6-708P-201ENST00000384217 107 ntBASIC2.15□□□□□ -2.07
RXRAP19793 Y_RNA.574-201ENST00000384766 95 ntBASIC2.15□□□□□ -2.07
RXRAP19793 MIR17-201ENST00000385012 84 ntBASIC2.15□□□□□ -2.07
RXRAP19793 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.15□□□□□ -2.07
RXRAP19793 snoU13.26-201ENST00000459452 105 ntBASIC2.15□□□□□ -2.07
RXRAP19793 AC010469.2-201ENST00000496412 480 ntBASIC2.15□□□□□ -2.07
RXRAP19793 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.15□□□□□ -2.07
RXRAP19793 RNU6-1041P-201ENST00000516254 102 ntBASIC2.15□□□□□ -2.07
RXRAP19793 RNVU1-2-201ENST00000516326 135 ntBASIC2.15□□□□□ -2.07
RXRAP19793 RNU6-107P-201ENST00000516643 102 ntBASIC2.15□□□□□ -2.07
RXRAP19793 SUB1P4-201ENST00000566062 339 ntBASIC2.15□□□□□ -2.07
RXRAP19793 PRR13P7-201ENST00000605538 430 ntBASIC2.15□□□□□ -2.07
RXRAP19793 AL021879.1-201ENST00000611756 288 ntBASIC2.15□□□□□ -2.07
RXRAP19793 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.15□□□□□ -2.07
RXRAP19793 AC006001.4-201ENST00000622243 395 ntBASIC2.15□□□□□ -2.07
RXRAP19793 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.15□□□□□ -2.07
RXRAP19793 Y_RNA.210-201ENST00000364161 110 ntBASIC2.14□□□□□ -2.07
RXRAP19793 RNU4-50P-201ENST00000364361 141 ntBASIC2.14□□□□□ -2.07
RXRAP19793 RNU6-1310P-201ENST00000384153 107 ntBASIC2.14□□□□□ -2.07
RXRAP19793 SNORA8-201ENST00000384574 139 ntBASIC2.14□□□□□ -2.07
RXRAP19793 MIR504-201ENST00000385065 83 ntBASIC2.14□□□□□ -2.07
RXRAP19793 U8.13-201ENST00000390842 128 ntBASIC2.14□□□□□ -2.07
RXRAP19793 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
RXRAP19793 CST2P1-201ENST00000425770 87 ntBASIC2.14□□□□□ -2.07
RXRAP19793 HMGN2P34-201ENST00000437647 269 ntBASIC2.14□□□□□ -2.07
RXRAP19793 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.14□□□□□ -2.07
RXRAP19793 AP002001.1-203ENST00000534002 267 ntBASIC2.14□□□□□ -2.07
RXRAP19793 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.14□□□□□ -2.07
RXRAP19793 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.14□□□□□ -2.07
RXRAP19793 MIR4503-201ENST00000582187 83 ntBASIC2.14□□□□□ -2.07
RXRAP19793 RPS29P30-201ENST00000600975 111 ntBASIC2.14□□□□□ -2.07
RXRAP19793 AL390123.1-201ENST00000603216 237 ntBASIC2.14□□□□□ -2.07
RXRAP19793 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
RXRAP19793 AC240442.1-201ENST00000616055 283 ntBASIC2.14□□□□□ -2.07
RXRAP19793 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.14□□□□□ -2.07
RXRAP19793 MIR3674-201ENST00000636576 68 ntBASIC2.14□□□□□ -2.07
RXRAP19793 CENPCP1-201ENST00000533085 2578 ntBASIC2.13□□□□□ -2.07
RXRAP19793 RNU6-862P-201ENST00000362804 105 ntBASIC2.13□□□□□ -2.07
RXRAP19793 RNU6-238P-201ENST00000363313 106 ntBASIC2.13□□□□□ -2.07
RXRAP19793 Y_RNA.152-201ENST00000363578 100 ntBASIC2.13□□□□□ -2.07
RXRAP19793 RNU6-961P-201ENST00000363893 105 ntBASIC2.13□□□□□ -2.07
RXRAP19793 SNORA16.1-201ENST00000364597 132 ntBASIC2.13□□□□□ -2.07
RXRAP19793 SNORA63.7-201ENST00000365579 123 ntBASIC2.13□□□□□ -2.07
RXRAP19793 AC019129.1-201ENST00000403786 261 ntBASIC2.13□□□□□ -2.07
RXRAP19793 MIR1302-3-201ENST00000408128 138 ntBASIC2.13□□□□□ -2.07
RXRAP19793 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.13□□□□□ -2.07
RXRAP19793 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.13□□□□□ -2.07
RXRAP19793 MIR4659A-201ENST00000580269 81 ntBASIC2.13□□□□□ -2.07
RXRAP19793 MIR3935-201ENST00000583472 104 ntBASIC2.13□□□□□ -2.07
RXRAP19793 MIR3149-201ENST00000584629 83 ntBASIC2.13□□□□□ -2.07
RXRAP19793 RAC1P9-201ENST00000604990 392 ntBASIC2.13□□□□□ -2.07
RXRAP19793 AC006435.5-201ENST00000624486 112 ntBASIC2.13□□□□□ -2.07
RXRAP19793 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
RXRAP19793 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RXRAP19793 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
RXRAP19793 Y_RNA.287-201ENST00000364853 94 ntBASIC2.12□□□□□ -2.07
RXRAP19793 Y_RNA.452-201ENST00000384202 108 ntBASIC2.12□□□□□ -2.07
RXRAP19793 Y_RNA.551-201ENST00000384661 102 ntBASIC2.12□□□□□ -2.07
RXRAP19793 MIR515-2-201ENST00000384883 83 ntBASIC2.12□□□□□ -2.07
RXRAP19793 MIR515-1-201ENST00000384884 83 ntBASIC2.12□□□□□ -2.07
RXRAP19793 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RXRAP19793 RNU6-1109P-201ENST00000391187 107 ntBASIC2.12□□□□□ -2.07
RXRAP19793 RNA5SP212-201ENST00000391223 107 ntBASIC2.12□□□□□ -2.07
RXRAP19793 RNU6-408P-201ENST00000515910 100 ntBASIC2.12□□□□□ -2.07
RXRAP19793 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.12□□□□□ -2.07
RXRAP19793 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.12□□□□□ -2.07
RXRAP19793 AL121655.1-201ENST00000605811 308 ntBASIC2.12□□□□□ -2.07
RXRAP19793 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
RXRAP19793 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.12□□□□□ -2.07
RXRAP19793 uc_338.20-201ENST00000621563 178 ntBASIC2.12□□□□□ -2.07
RXRAP19793 MIR7843-201ENST00000622274 79 ntBASIC2.12□□□□□ -2.07
RXRAP19793 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RXRAP19793 RNA5SP276-201ENST00000362580 94 ntBASIC2.11□□□□□ -2.07
RXRAP19793 RNU6-1266P-201ENST00000362794 105 ntBASIC2.11□□□□□ -2.07
RXRAP19793 RNU6-454P-201ENST00000364292 107 ntBASIC2.11□□□□□ -2.07
RXRAP19793 RNU6-926P-201ENST00000384075 107 ntBASIC2.11□□□□□ -2.07
RXRAP19793 Y_RNA.471-201ENST00000384312 102 ntBASIC2.11□□□□□ -2.07
RXRAP19793 Y_RNA.512-201ENST00000384518 102 ntBASIC2.11□□□□□ -2.07
RXRAP19793 MIR583-201ENST00000384846 75 ntBASIC2.11□□□□□ -2.07
RXRAP19793 RNA5SP475-201ENST00000410568 110 ntBASIC2.11□□□□□ -2.07
RXRAP19793 AC009310.1-201ENST00000414414 451 ntBASIC2.11□□□□□ -2.07
RXRAP19793 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.11□□□□□ -2.07
RXRAP19793 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.11□□□□□ -2.07
RXRAP19793 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.11□□□□□ -2.07
RXRAP19793 AC073910.1-201ENST00000445047 438 ntBASIC2.11□□□□□ -2.07
RXRAP19793 SNORD65B-201ENST00000459126 73 ntBASIC2.11□□□□□ -2.07
RXRAP19793 RNU6-397P-201ENST00000516226 104 ntBASIC2.11□□□□□ -2.07
RXRAP19793 RNA5SP364-201ENST00000516938 78 ntBASIC2.11□□□□□ -2.07
RXRAP19793 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.11□□□□□ -2.07
RXRAP19793 AL161670.1-201ENST00000554348 137 ntBASIC2.11□□□□□ -2.07
RXRAP19793 AC010900.2-201ENST00000604508 210 ntBASIC2.11□□□□□ -2.07
RXRAP19793 AC069114.2-201ENST00000604699 304 ntBASIC2.11□□□□□ -2.07
RXRAP19793 AC005828.6-201ENST00000606610 232 ntBASIC2.11□□□□□ -2.07
RXRAP19793 MIR8081-201ENST00000611533 95 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms