Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR562-201ENST00000384894 95 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 RNU6-440P-201ENST00000390882 105 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 RNU6-1001P-201ENST00000411265 100 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 AC005002.2-201ENST00000438228 269 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.19□□□□□ -2.22
XRCC1P18887 PCNPP5-201ENST00000452246 481 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 RPS27P22-201ENST00000478056 241 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 RPL30P7-201ENST00000479312 323 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.19□□□□□ -2.22
XRCC1P18887 HMGN1P7-201ENST00000491722 313 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.19□□□□□ -2.22
XRCC1P18887 SNORA31.10-201ENST00000516482 106 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 RNU7-30P-201ENST00000516835 62 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 MIR2355-201ENST00000517199 87 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 MTND4LP26-201ENST00000518144 282 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.19□□□□□ -2.22
XRCC1P18887 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.19□□□□□ -2.22
XRCC1P18887 AC125232.2-201ENST00000592457 143 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 AC021506.2-201ENST00000612354 169 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 AL078604.3-201ENST00000615580 211 ntBASIC1.19□□□□□ -2.22
XRCC1P18887 MIR410-201ENST00000362222 80 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 Y_RNA.166-201ENST00000363730 102 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 Y_RNA.557-201ENST00000384680 107 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 AL606517.2-201ENST00000442855 241 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 MTND3P10-201ENST00000450967 341 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 RNU7-87P-201ENST00000459343 62 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 RPL17P19-201ENST00000489069 552 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 AC010469.2-201ENST00000496412 480 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.18□□□□□ -2.22
XRCC1P18887 RN7SKP49-201ENST00000516675 260 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 AC019176.1-201ENST00000518519 225 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 AL390123.1-201ENST00000603216 237 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 AC084782.3-201ENST00000612282 578 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 AC018630.2-201ENST00000534866 2403 ntBASIC1.18□□□□□ -2.22
XRCC1P18887 RNU6-845P-201ENST00000362578 103 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 RNU6-879P-201ENST00000364328 108 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 Y_RNA.279-201ENST00000364763 95 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 RNA5SP259-201ENST00000365541 109 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 Y_RNA.473-201ENST00000384333 102 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 Y_RNA.498-201ENST00000384460 102 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 ELOCP21-201ENST00000412558 336 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 AC010154.1-201ENST00000425857 269 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.17□□□□□ -2.22
XRCC1P18887 AL135790.2-201ENST00000437701 267 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 SUMO1P2-201ENST00000452524 304 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 RPL7P42-201ENST00000481005 679 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.17□□□□□ -2.22
XRCC1P18887 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.17□□□□□ -2.22
XRCC1P18887 RPL21P9-201ENST00000556149 474 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 SNORA28-201ENST00000606769 126 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 MIR8070-201ENST00000616510 88 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 AC092794.2-201ENST00000620933 563 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 AL513423.1-201ENST00000621695 132 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 CASC19-280ENST00000642102 1351 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
XRCC1P18887 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 AC073544.1-201ENST00000600110 1595 ntBASIC1.17□□□□□ -2.22
XRCC1P18887 Y_RNA.238-201ENST00000364441 102 ntBASIC1.16□□□□□ -2.22
XRCC1P18887 SNORA75.4-201ENST00000391278 119 ntBASIC1.16□□□□□ -2.22
XRCC1P18887 AL353997.1-201ENST00000432936 108 ntBASIC1.16□□□□□ -2.22
XRCC1P18887 RPL23AP50-201ENST00000434149 455 ntBASIC1.16□□□□□ -2.22
XRCC1P18887 Y_RNA.691-201ENST00000516611 103 ntBASIC1.16□□□□□ -2.22
XRCC1P18887 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.16□□□□□ -2.22
XRCC1P18887 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.16□□□□□ -2.22
XRCC1P18887 AC091895.1-201ENST00000624494 256 ntBASIC1.16□□□□□ -2.22
XRCC1P18887 Y_RNA.160-201ENST00000363677 92 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 Y_RNA.404-201ENST00000383978 102 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 SNORA20B-201ENST00000384220 132 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 Y_RNA.505-201ENST00000384489 102 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 AC092423.1-201ENST00000430165 186 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.15□□□□□ -2.23
XRCC1P18887 Y_RNA.635-201ENST00000459041 101 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 AC097462.1-201ENST00000514125 324 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 RNU7-172P-201ENST00000517125 64 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 AC023157.2-201ENST00000540596 141 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 AC018448.1-201ENST00000552843 316 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 AL365434.2-201ENST00000607979 234 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 AC073349.3-201ENST00000617616 186 ntBASIC1.15□□□□□ -2.23
XRCC1P18887 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
XRCC1P18887 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
XRCC1P18887 RNU6-874P-201ENST00000362390 105 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 RNU1-22P-201ENST00000363334 158 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 Y_RNA.248-201ENST00000364501 109 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 Y_RNA.358-201ENST00000365491 99 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 RNU6-1310P-201ENST00000384153 107 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 RNA5SP475-201ENST00000410568 110 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.14□□□□□ -2.23
XRCC1P18887 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.14□□□□□ -2.23
XRCC1P18887 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.14□□□□□ -2.23
XRCC1P18887 RPL39P38-201ENST00000467018 153 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 AC093852.1-201ENST00000503587 266 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.14□□□□□ -2.23
XRCC1P18887 SCARNA16.2-201ENST00000516520 172 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 RNU7-28P-201ENST00000516759 62 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 AC022868.1-201ENST00000517767 391 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 SUMO2P16-201ENST00000519475 264 ntBASIC1.14□□□□□ -2.23
XRCC1P18887 AC027419.1-201ENST00000522976 328 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms