Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SNORA7.4-201ENST00000384249 137 ntBASIC3.45□□□□□ -1.86
LIG1P18858 MIR1294-201ENST00000408503 142 ntBASIC3.45□□□□□ -1.86
LIG1P18858 AL035461.1-201ENST00000421490 332 ntBASIC3.45□□□□□ -1.86
LIG1P18858 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.45□□□□□ -1.86
LIG1P18858 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.45□□□□□ -1.86
LIG1P18858 RNU7-14P-201ENST00000459331 62 ntBASIC3.45□□□□□ -1.86
LIG1P18858 RNU6-221P-201ENST00000459541 99 ntBASIC3.45□□□□□ -1.86
LIG1P18858 RPS26P55-201ENST00000471178 356 ntBASIC3.45□□□□□ -1.86
LIG1P18858 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.45□□□□□ -1.86
LIG1P18858 RNU7-116P-201ENST00000516940 62 ntBASIC3.45□□□□□ -1.86
LIG1P18858 AC127455.1-201ENST00000565496 145 ntBASIC3.45□□□□□ -1.86
LIG1P18858 MIR4753-201ENST00000585119 83 ntBASIC3.45□□□□□ -1.86
LIG1P18858 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.45□□□□□ -1.86
LIG1P18858 snoZ196.1-201ENST00000625269 89 ntBASIC3.45□□□□□ -1.86
LIG1P18858 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.45□□□□□ -1.86
LIG1P18858 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
LIG1P18858 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
LIG1P18858 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.44□□□□□ -1.86
LIG1P18858 Y_RNA.251-201ENST00000364551 99 ntBASIC3.44□□□□□ -1.86
LIG1P18858 RNU6-975P-201ENST00000384296 105 ntBASIC3.44□□□□□ -1.86
LIG1P18858 SNORD116-13-201ENST00000384408 92 ntBASIC3.44□□□□□ -1.86
LIG1P18858 Y_RNA.521-201ENST00000384560 114 ntBASIC3.44□□□□□ -1.86
LIG1P18858 Y_RNA.563-201ENST00000384707 108 ntBASIC3.44□□□□□ -1.86
LIG1P18858 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.44□□□□□ -1.86
LIG1P18858 RNA5SP274-201ENST00000410484 108 ntBASIC3.44□□□□□ -1.86
LIG1P18858 SNORD65B-201ENST00000459126 73 ntBASIC3.44□□□□□ -1.86
LIG1P18858 Y_RNA.686-201ENST00000516548 134 ntBASIC3.44□□□□□ -1.86
LIG1P18858 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.44□□□□□ -1.86
LIG1P18858 MIR4765-201ENST00000585007 77 ntBASIC3.44□□□□□ -1.86
LIG1P18858 POLR3GP1-201ENST00000594073 261 ntBASIC3.44□□□□□ -1.86
LIG1P18858 AC005972.2-201ENST00000604690 348 ntBASIC3.44□□□□□ -1.86
LIG1P18858 AC093732.2-201ENST00000607950 274 ntBASIC3.44□□□□□ -1.86
LIG1P18858 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIG1P18858 CENPCP1-201ENST00000533085 2578 ntBASIC3.43□□□□□ -1.86
LIG1P18858 MIR422A-201ENST00000362286 90 ntBASIC3.43□□□□□ -1.86
LIG1P18858 SNORD15B-201ENST00000384714 146 ntBASIC3.43□□□□□ -1.86
LIG1P18858 RNU6-460P-201ENST00000391158 108 ntBASIC3.43□□□□□ -1.86
LIG1P18858 RNA5SP496-201ENST00000391240 109 ntBASIC3.43□□□□□ -1.86
LIG1P18858 SNORA75.5-201ENST00000391291 81 ntBASIC3.43□□□□□ -1.86
LIG1P18858 RPL39P40-201ENST00000445481 146 ntBASIC3.43□□□□□ -1.86
LIG1P18858 RNA5SP112-201ENST00000515937 99 ntBASIC3.43□□□□□ -1.86
LIG1P18858 RNU6-659P-201ENST00000516454 104 ntBASIC3.43□□□□□ -1.86
LIG1P18858 AP001328.1-201ENST00000528550 176 ntBASIC3.43□□□□□ -1.86
LIG1P18858 AC011603.4-201ENST00000611325 277 ntBASIC3.43□□□□□ -1.86
LIG1P18858 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIG1P18858 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.43□□□□□ -1.86
LIG1P18858 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.43□□□□□ -1.86
LIG1P18858 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.42□□□□□ -1.86
LIG1P18858 RNU6-525P-201ENST00000363685 104 ntBASIC3.42□□□□□ -1.86
LIG1P18858 RNU6-674P-201ENST00000363831 107 ntBASIC3.42□□□□□ -1.86
LIG1P18858 RNU6-461P-201ENST00000364195 107 ntBASIC3.42□□□□□ -1.86
LIG1P18858 RNU6-1325P-201ENST00000364905 105 ntBASIC3.42□□□□□ -1.86
LIG1P18858 RNU6-597P-201ENST00000365620 102 ntBASIC3.42□□□□□ -1.86
LIG1P18858 RNU6-44P-201ENST00000384045 107 ntBASIC3.42□□□□□ -1.86
LIG1P18858 RNU6-588P-201ENST00000410281 105 ntBASIC3.42□□□□□ -1.86
LIG1P18858 SNRPGP8-201ENST00000454064 226 ntBASIC3.42□□□□□ -1.86
LIG1P18858 AC008885.1-201ENST00000514930 301 ntBASIC3.42□□□□□ -1.86
LIG1P18858 MIR3117-201ENST00000584034 78 ntBASIC3.42□□□□□ -1.86
LIG1P18858 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.42□□□□□ -1.86
LIG1P18858 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LIG1P18858 SNORA68.1-201ENST00000364537 132 ntBASIC3.41□□□□□ -1.86
LIG1P18858 RNU6-234P-201ENST00000365229 104 ntBASIC3.41□□□□□ -1.86
LIG1P18858 RNU6-1083P-201ENST00000384022 107 ntBASIC3.41□□□□□ -1.86
LIG1P18858 Z92545.1-201ENST00000411782 234 ntBASIC3.41□□□□□ -1.86
LIG1P18858 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.41□□□□□ -1.86
LIG1P18858 AC022018.1-201ENST00000430685 241 ntBASIC3.41□□□□□ -1.86
LIG1P18858 RNU6-437P-201ENST00000459408 95 ntBASIC3.41□□□□□ -1.86
LIG1P18858 MIR449C-201ENST00000516047 92 ntBASIC3.41□□□□□ -1.86
LIG1P18858 AC109329.2-201ENST00000519658 482 ntBASIC3.41□□□□□ -1.86
LIG1P18858 AC005000.2-201ENST00000605468 310 ntBASIC3.41□□□□□ -1.86
LIG1P18858 U7.2-201ENST00000607576 63 ntBASIC3.41□□□□□ -1.86
LIG1P18858 AC090517.3-201ENST00000625170 141 ntBASIC3.41□□□□□ -1.86
LIG1P18858 MIR7515-201ENST00000637837 67 ntBASIC3.41□□□□□ -1.86
LIG1P18858 AC009487.4-201ENST00000624969 3585 ntBASIC3.41□□□□□ -1.86
LIG1P18858 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LIG1P18858 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIG1P18858 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LIG1P18858 RNU6-486P-201ENST00000363116 107 ntBASIC3.4□□□□□ -1.87
LIG1P18858 SNORD45.3-201ENST00000363836 72 ntBASIC3.4□□□□□ -1.87
LIG1P18858 SNORD31B-201ENST00000364977 69 ntBASIC3.4□□□□□ -1.87
LIG1P18858 SNORA54-201ENST00000384281 123 ntBASIC3.4□□□□□ -1.87
LIG1P18858 RN7SKP101-201ENST00000411376 320 ntBASIC3.4□□□□□ -1.87
LIG1P18858 AL135786.1-201ENST00000415892 214 ntBASIC3.4□□□□□ -1.87
LIG1P18858 AL445687.1-201ENST00000439946 251 ntBASIC3.4□□□□□ -1.87
LIG1P18858 AC083906.5-201ENST00000503722 328 ntBASIC3.4□□□□□ -1.87
LIG1P18858 RNA5SP76-201ENST00000516277 87 ntBASIC3.4□□□□□ -1.87
LIG1P18858 AC006435.5-201ENST00000624486 112 ntBASIC3.4□□□□□ -1.87
LIG1P18858 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIG1P18858 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIG1P18858 SNORD14D-201ENST00000384390 87 ntBASIC3.39□□□□□ -1.87
LIG1P18858 AL590004.2-201ENST00000404787 371 ntBASIC3.39□□□□□ -1.87
LIG1P18858 AL512604.1-201ENST00000404812 257 ntBASIC3.39□□□□□ -1.87
LIG1P18858 RNU2-55P-201ENST00000411146 174 ntBASIC3.39□□□□□ -1.87
LIG1P18858 AC010154.1-201ENST00000425857 269 ntBASIC3.39□□□□□ -1.87
LIG1P18858 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.39□□□□□ -1.87
LIG1P18858 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.39□□□□□ -1.87
LIG1P18858 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.39□□□□□ -1.87
LIG1P18858 RPL23AP54-201ENST00000495129 419 ntBASIC3.39□□□□□ -1.87
LIG1P18858 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.39□□□□□ -1.87
LIG1P18858 RNA5SP20-201ENST00000515976 84 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms