Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RNA5SP482-201ENST00000391269 118 ntBASIC4.68□□□□□ -1.66
CD44P16070 RPS16P5-201ENST00000406501 404 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-447P-201ENST00000410293 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-1118P-201ENST00000410382 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-1076P-201ENST00000410397 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-355P-201ENST00000410427 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-791P-201ENST00000410467 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-705P-201ENST00000410601 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-1100P-201ENST00000410691 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU2-63P-201ENST00000410792 194 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-860P-201ENST00000410860 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-1217P-201ENST00000411276 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-785P-201ENST00000411324 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.68□□□□□ -1.66
CD44P16070 RN7SL98P-201ENST00000462271 300 ntBASIC4.68□□□□□ -1.66
CD44P16070 RNU6-586P-201ENST00000517265 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC4.68□□□□□ -1.66
CD44P16070 MIR4791-201ENST00000607666 84 ntBASIC4.68□□□□□ -1.66
CD44P16070 U6.90-201ENST00000614007 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 U6.70-201ENST00000620287 104 ntBASIC4.68□□□□□ -1.66
CD44P16070 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD44P16070 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD44P16070 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.68□□□□□ -1.66
CD44P16070 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD44P16070 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CD44P16070 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CD44P16070 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.67□□□□□ -1.66
CD44P16070 Y_RNA.236-201ENST00000364427 111 ntBASIC4.67□□□□□ -1.66
CD44P16070 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CD44P16070 RNA5SP306-201ENST00000411087 107 ntBASIC4.67□□□□□ -1.66
CD44P16070 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.67□□□□□ -1.66
CD44P16070 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.67□□□□□ -1.66
CD44P16070 RNU7-48P-201ENST00000458875 63 ntBASIC4.67□□□□□ -1.66
CD44P16070 VWA8P1-201ENST00000510889 176 ntBASIC4.67□□□□□ -1.66
CD44P16070 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.67□□□□□ -1.66
CD44P16070 RNA5SP519-201ENST00000516480 119 ntBASIC4.67□□□□□ -1.66
CD44P16070 RNA5SP73-201ENST00000516744 108 ntBASIC4.67□□□□□ -1.66
CD44P16070 RNU6-958P-201ENST00000516995 106 ntBASIC4.67□□□□□ -1.66
CD44P16070 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.67□□□□□ -1.66
CD44P16070 AC140479.6-201ENST00000633535 357 ntBASIC4.67□□□□□ -1.66
CD44P16070 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD44P16070 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CD44P16070 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD44P16070 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.67□□□□□ -1.66
CD44P16070 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD44P16070 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.66□□□□□ -1.66
CD44P16070 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.66□□□□□ -1.66
CD44P16070 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD44P16070 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD44P16070 Y_RNA.98-201ENST00000363109 102 ntBASIC4.66□□□□□ -1.66
CD44P16070 RNU6-602P-201ENST00000411155 105 ntBASIC4.66□□□□□ -1.66
CD44P16070 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.66□□□□□ -1.66
CD44P16070 SNORA31.1-201ENST00000515993 133 ntBASIC4.66□□□□□ -1.66
CD44P16070 SNORA31.5-201ENST00000516190 133 ntBASIC4.66□□□□□ -1.66
CD44P16070 SNORA18.5-201ENST00000516616 101 ntBASIC4.66□□□□□ -1.66
CD44P16070 AC105081.1-201ENST00000617727 106 ntBASIC4.66□□□□□ -1.66
CD44P16070 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC4.66□□□□□ -1.66
CD44P16070 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD44P16070 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD44P16070 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD44P16070 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.65□□□□□ -1.66
CD44P16070 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CD44P16070 MIR448-201ENST00000362131 111 ntBASIC4.65□□□□□ -1.67
CD44P16070 RNU1-14P-201ENST00000362759 152 ntBASIC4.65□□□□□ -1.67
CD44P16070 RNA5SP479-201ENST00000364858 117 ntBASIC4.65□□□□□ -1.67
CD44P16070 SNORA8-201ENST00000384574 139 ntBASIC4.65□□□□□ -1.67
CD44P16070 RNA5SP323-201ENST00000391094 133 ntBASIC4.65□□□□□ -1.67
CD44P16070 RNA5SP39-201ENST00000411245 120 ntBASIC4.65□□□□□ -1.67
CD44P16070 RPS29P19-201ENST00000479709 171 ntBASIC4.65□□□□□ -1.67
CD44P16070 RPL32P34-201ENST00000486380 400 ntBASIC4.65□□□□□ -1.67
CD44P16070 AC006483.1-201ENST00000487308 313 ntBASIC4.65□□□□□ -1.67
CD44P16070 RNA5SP49-201ENST00000516450 115 ntBASIC4.65□□□□□ -1.67
CD44P16070 MIR4715-201ENST00000584117 79 ntBASIC4.65□□□□□ -1.67
CD44P16070 AL020996.3-201ENST00000606617 222 ntBASIC4.65□□□□□ -1.67
CD44P16070 AC067747.1-201ENST00000608026 250 ntBASIC4.65□□□□□ -1.67
CD44P16070 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD44P16070 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD44P16070 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD44P16070 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD44P16070 SNORD114-10-201ENST00000363409 72 ntBASIC4.64□□□□□ -1.67
CD44P16070 AL732292.1-201ENST00000426692 226 ntBASIC4.64□□□□□ -1.67
CD44P16070 RNU7-67P-201ENST00000459003 62 ntBASIC4.64□□□□□ -1.67
CD44P16070 Y_RNA.648-201ENST00000459455 110 ntBASIC4.64□□□□□ -1.67
CD44P16070 AC109327.1-201ENST00000471666 403 ntBASIC4.64□□□□□ -1.67
CD44P16070 RNU6-1041P-201ENST00000516254 102 ntBASIC4.64□□□□□ -1.67
CD44P16070 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.64□□□□□ -1.67
CD44P16070 AP001362.1-201ENST00000625165 124 ntBASIC4.64□□□□□ -1.67
CD44P16070 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.64□□□□□ -1.67
CD44P16070 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CD44P16070 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
CD44P16070 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.63□□□□□ -1.67
CD44P16070 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.63□□□□□ -1.67
CD44P16070 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.63□□□□□ -1.67
CD44P16070 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD44P16070 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CD44P16070 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD44P16070 Y_RNA.36-201ENST00000362602 112 ntBASIC4.63□□□□□ -1.67
CD44P16070 RNU6-198P-201ENST00000384258 104 ntBASIC4.63□□□□□ -1.67
CD44P16070 MIR1179-201ENST00000408703 91 ntBASIC4.63□□□□□ -1.67
CD44P16070 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms