Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RN7SKP179-201ENST00000516126 217 ntBASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-307P-201ENST00000516743 106 ntBASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 RNU7-30P-201ENST00000516835 62 ntBASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 RPL21P9-201ENST00000556149 474 ntBASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 MIR3684-201ENST00000579779 74 ntBASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 AC005899.2-201ENST00000584353 90 ntBASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 AC104984.5-201ENST00000586878 94 ntBASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 AL162424.1-201ENST00000602325 221 ntBASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 MIR6079-201ENST00000635807 62 ntBASIC0.96□□□□□ -2.26
IGHV3-43DP0DP04 MIR378A-201ENST00000362177 66 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 RNA5SP327-201ENST00000362494 101 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 Y_RNA.498-201ENST00000384460 102 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 AP1B1P2-201ENST00000416196 106 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 PCNPP5-201ENST00000452246 481 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 U8.22-201ENST00000459141 133 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 RPL39P38-201ENST00000467018 153 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 AC092991.1-201ENST00000477176 376 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 AC074133.1-201ENST00000515696 183 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 SCARNA16.2-201ENST00000516520 172 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 AC018448.1-201ENST00000552843 316 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 SNORA28-201ENST00000606769 126 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 AC092794.2-201ENST00000620933 563 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 AC106754.2-201ENST00000623006 233 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
IGHV3-43DP0DP04 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 Y_RNA.265-201ENST00000364677 108 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-767P-201ENST00000384132 107 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-505P-201ENST00000384427 107 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-376P-201ENST00000384731 106 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 MIR660-201ENST00000385235 97 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 SNORA75.4-201ENST00000391278 119 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 AC018865.2-201ENST00000423631 129 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-625P-201ENST00000459412 107 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 RNA5SP20-201ENST00000515976 84 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 RN7SKP49-201ENST00000516675 260 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 RNU2-56P-201ENST00000516826 190 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 MIR4778-201ENST00000577635 80 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 MIR1244-1-201ENST00000612829 85 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 MIR1244-3-201ENST00000635744 85 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 MIR1244-2-201ENST00000636449 85 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 AC099654.5-201ENST00000636479 350 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 MIR1244-4-202ENST00000636813 85 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 AC068647.2-201ENST00000637380 353 ntBASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
IGHV3-43DP0DP04 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 SNORA27.1-201ENST00000362604 124 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 RNU4-76P-201ENST00000364509 141 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 Y_RNA.267-201ENST00000364679 109 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 AL591704.2-201ENST00000421658 181 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 FGF7P6-202ENST00000451282 293 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 AC091021.1-201ENST00000468051 388 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 RPL17P19-201ENST00000489069 552 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 AC116353.2-201ENST00000505332 712 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 SNORA40.9-201ENST00000515895 93 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 AP000942.3-201ENST00000603702 160 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 CASC19-280ENST00000642102 1351 ntBASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.93□□□□□ -2.26
IGHV3-43DP0DP04 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 AL391987.6-201ENST00000305671 199 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 Y_RNA.160-201ENST00000363677 92 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-318P-201ENST00000384283 103 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 MIR562-201ENST00000384894 95 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-482P-201ENST00000391068 107 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 RNA5SP475-201ENST00000410568 110 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 RAB28P5-201ENST00000427490 651 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 AL133373.1-201ENST00000497098 94 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-922P-201ENST00000516753 99 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-1213P-201ENST00000517075 94 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 AC080078.2-201ENST00000603766 501 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 MIR6078-201ENST00000611069 100 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 U6atac.1-201ENST00000616025 117 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 MIR3674-201ENST00000636576 68 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 AL669831.3-213ENST00000636676 183 ntBASIC0.92□□□□□ -2.26
IGHV3-43DP0DP04 MIR410-201ENST00000362222 80 ntBASIC0.91□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-845P-201ENST00000362578 103 ntBASIC0.91□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-99P-201ENST00000364721 107 ntBASIC0.91□□□□□ -2.26
IGHV3-43DP0DP04 AC114482.1-201ENST00000418010 247 ntBASIC0.91□□□□□ -2.26
IGHV3-43DP0DP04 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.91□□□□□ -2.26
IGHV3-43DP0DP04 CALM2P4-201ENST00000430810 426 ntBASIC0.91□□□□□ -2.26
IGHV3-43DP0DP04 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
IGHV3-43DP0DP04 MIR2053-201ENST00000459295 91 ntBASIC0.91□□□□□ -2.26
IGHV3-43DP0DP04 MTND4P17-201ENST00000470444 350 ntBASIC0.91□□□□□ -2.26
IGHV3-43DP0DP04 RNU6-1278P-201ENST00000516130 107 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms