Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.9□□□□□ -2.11
CD48P09326 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CD48P09326 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.89□□□□□ -2.11
CD48P09326 Y_RNA.84-201ENST00000363011 104 ntBASIC1.89□□□□□ -2.11
CD48P09326 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.89□□□□□ -2.11
CD48P09326 RNU6-975P-201ENST00000384296 105 ntBASIC1.89□□□□□ -2.11
CD48P09326 RNU6-505P-201ENST00000384427 107 ntBASIC1.89□□□□□ -2.11
CD48P09326 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CD48P09326 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.89□□□□□ -2.11
CD48P09326 MIR1302-6-201ENST00000408466 90 ntBASIC1.89□□□□□ -2.11
CD48P09326 MIR1185-2-201ENST00000408687 86 ntBASIC1.89□□□□□ -2.11
CD48P09326 RPL23AP36-201ENST00000413895 458 ntBASIC1.89□□□□□ -2.11
CD48P09326 RPL21P38-201ENST00000418090 167 ntBASIC1.89□□□□□ -2.11
CD48P09326 AL445685.2-201ENST00000422551 342 ntBASIC1.89□□□□□ -2.11
CD48P09326 TOMM22P2-201ENST00000430735 237 ntBASIC1.89□□□□□ -2.11
CD48P09326 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.89□□□□□ -2.11
CD48P09326 RNU6-496P-201ENST00000516145 99 ntBASIC1.89□□□□□ -2.11
CD48P09326 RNU1-117P-201ENST00000517041 158 ntBASIC1.89□□□□□ -2.11
CD48P09326 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.89□□□□□ -2.11
CD48P09326 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.89□□□□□ -2.11
CD48P09326 AC055872.1-201ENST00000570978 278 ntBASIC1.89□□□□□ -2.11
CD48P09326 MIR4658-201ENST00000584344 65 ntBASIC1.89□□□□□ -2.11
CD48P09326 AC011373.1-201ENST00000607270 237 ntBASIC1.89□□□□□ -2.11
CD48P09326 U6.104-201ENST00000637979 90 ntBASIC1.89□□□□□ -2.11
CD48P09326 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CD48P09326 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CD48P09326 SNORD81.1-201ENST00000363064 77 ntBASIC1.88□□□□□ -2.11
CD48P09326 Y_RNA.101-201ENST00000363154 102 ntBASIC1.88□□□□□ -2.11
CD48P09326 SNORD113-8-201ENST00000363497 74 ntBASIC1.88□□□□□ -2.11
CD48P09326 RNU6-702P-201ENST00000364982 107 ntBASIC1.88□□□□□ -2.11
CD48P09326 RNU6-1175P-201ENST00000365200 107 ntBASIC1.88□□□□□ -2.11
CD48P09326 RNU1-52P-201ENST00000384190 164 ntBASIC1.88□□□□□ -2.11
CD48P09326 RNU6-1026P-201ENST00000384465 108 ntBASIC1.88□□□□□ -2.11
CD48P09326 MIR215-201ENST00000384858 110 ntBASIC1.88□□□□□ -2.11
CD48P09326 MT-TW-201ENST00000387382 68 ntBASIC1.88□□□□□ -2.11
CD48P09326 RNU2-54P-201ENST00000410299 190 ntBASIC1.88□□□□□ -2.11
CD48P09326 RNU6-1203P-201ENST00000410703 110 ntBASIC1.88□□□□□ -2.11
CD48P09326 RNU6-1199P-201ENST00000411249 104 ntBASIC1.88□□□□□ -2.11
CD48P09326 SRIP3-201ENST00000413200 219 ntBASIC1.88□□□□□ -2.11
CD48P09326 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.88□□□□□ -2.11
CD48P09326 AC123900.1-201ENST00000420390 96 ntBASIC1.88□□□□□ -2.11
CD48P09326 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.88□□□□□ -2.11
CD48P09326 MTCO1P44-201ENST00000441935 243 ntBASIC1.88□□□□□ -2.11
CD48P09326 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.88□□□□□ -2.11
CD48P09326 AL137159.1-201ENST00000452808 512 ntBASIC1.88□□□□□ -2.11
CD48P09326 AC114982.1-201ENST00000469402 321 ntBASIC1.88□□□□□ -2.11
CD48P09326 RNA5SP490-201ENST00000517141 136 ntBASIC1.88□□□□□ -2.11
CD48P09326 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
CD48P09326 MIR4753-201ENST00000585119 83 ntBASIC1.88□□□□□ -2.11
CD48P09326 AC245884.12-201ENST00000615364 59 ntBASIC1.88□□□□□ -2.11
CD48P09326 AL590240.4-201ENST00000616908 390 ntBASIC1.88□□□□□ -2.11
CD48P09326 AC127459.3-201ENST00000624328 466 ntBASIC1.88□□□□□ -2.11
CD48P09326 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CD48P09326 AC092881.1-201ENST00000638218 2733 ntBASIC1.88□□□□□ -2.11
CD48P09326 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CD48P09326 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CD48P09326 SNORD114-1-201ENST00000362705 72 ntBASIC1.87□□□□□ -2.11
CD48P09326 RNU6-454P-201ENST00000364292 107 ntBASIC1.87□□□□□ -2.11
CD48P09326 RNU6-438P-201ENST00000365561 103 ntBASIC1.87□□□□□ -2.11
CD48P09326 Y_RNA.396-201ENST00000383949 103 ntBASIC1.87□□□□□ -2.11
CD48P09326 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.87□□□□□ -2.11
CD48P09326 AC096920.1-201ENST00000423991 241 ntBASIC1.87□□□□□ -2.11
CD48P09326 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.87□□□□□ -2.11
CD48P09326 AC009238.1-201ENST00000442165 424 ntBASIC1.87□□□□□ -2.11
CD48P09326 AC009237.6-201ENST00000446969 424 ntBASIC1.87□□□□□ -2.11
CD48P09326 AC074290.1-201ENST00000448883 135 ntBASIC1.87□□□□□ -2.11
CD48P09326 HSPE1P25-201ENST00000455484 251 ntBASIC1.87□□□□□ -2.11
CD48P09326 RNU7-57P-201ENST00000459540 60 ntBASIC1.87□□□□□ -2.11
CD48P09326 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
CD48P09326 RNU2-34P-201ENST00000516534 121 ntBASIC1.87□□□□□ -2.11
CD48P09326 RNU6-667P-201ENST00000517186 102 ntBASIC1.87□□□□□ -2.11
CD48P09326 RNU2-12P-201ENST00000517216 168 ntBASIC1.87□□□□□ -2.11
CD48P09326 CYCSP26-201ENST00000534107 320 ntBASIC1.87□□□□□ -2.11
CD48P09326 MIR3684-201ENST00000579779 74 ntBASIC1.87□□□□□ -2.11
CD48P09326 AL109918.3-201ENST00000603072 338 ntBASIC1.87□□□□□ -2.11
CD48P09326 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.87□□□□□ -2.11
CD48P09326 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.87□□□□□ -2.11
CD48P09326 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CD48P09326 MIR335-201ENST00000362173 94 ntBASIC1.86□□□□□ -2.11
CD48P09326 RNU4-90P-201ENST00000362773 141 ntBASIC1.86□□□□□ -2.11
CD48P09326 RNA5SP99-201ENST00000364020 114 ntBASIC1.86□□□□□ -2.11
CD48P09326 Y_RNA.243-201ENST00000364481 109 ntBASIC1.86□□□□□ -2.11
CD48P09326 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
CD48P09326 Y_RNA.446-201ENST00000384178 104 ntBASIC1.86□□□□□ -2.11
CD48P09326 Y_RNA.461-201ENST00000384263 103 ntBASIC1.86□□□□□ -2.11
CD48P09326 Y_RNA.483-201ENST00000384380 101 ntBASIC1.86□□□□□ -2.11
CD48P09326 MT-TG-201ENST00000387429 68 ntBASIC1.86□□□□□ -2.11
CD48P09326 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.86□□□□□ -2.11
CD48P09326 AC139712.2-201ENST00000424302 339 ntBASIC1.86□□□□□ -2.11
CD48P09326 SNORD127-201ENST00000458892 86 ntBASIC1.86□□□□□ -2.11
CD48P09326 RNU6-221P-201ENST00000459541 99 ntBASIC1.86□□□□□ -2.11
CD48P09326 TRBVB-201ENST00000477100 408 ntBASIC1.86□□□□□ -2.11
CD48P09326 RNU6-107P-201ENST00000516643 102 ntBASIC1.86□□□□□ -2.11
CD48P09326 AC009127.3-201ENST00000570531 403 ntBASIC1.86□□□□□ -2.11
CD48P09326 AP001282.2-201ENST00000616149 309 ntBASIC1.86□□□□□ -2.11
CD48P09326 AL353997.5-201ENST00000618886 171 ntBASIC1.86□□□□□ -2.11
CD48P09326 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.86□□□□□ -2.11
CD48P09326 AC091932.3-201ENST00000624223 323 ntBASIC1.86□□□□□ -2.11
CD48P09326 AC010615.1-201ENST00000594254 1764 ntBASIC1.85□□□□□ -2.11
CD48P09326 MIR340-201ENST00000362125 95 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms