Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 U6.115-201ENST00000636045 103 ntBASIC3.58□□□□□ -1.84
NEFMP07197 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.58□□□□□ -1.84
NEFMP07197 RNU6-199P-201ENST00000362954 107 ntBASIC3.57□□□□□ -1.84
NEFMP07197 RNU6-1205P-201ENST00000363625 106 ntBASIC3.57□□□□□ -1.84
NEFMP07197 RNU4-10P-201ENST00000364383 140 ntBASIC3.57□□□□□ -1.84
NEFMP07197 MIR539-201ENST00000365690 78 ntBASIC3.57□□□□□ -1.84
NEFMP07197 SNORA67.2-201ENST00000384300 149 ntBASIC3.57□□□□□ -1.84
NEFMP07197 Y_RNA.500-201ENST00000384466 111 ntBASIC3.57□□□□□ -1.84
NEFMP07197 RNU1-57P-201ENST00000384491 166 ntBASIC3.57□□□□□ -1.84
NEFMP07197 RNA5SP272-201ENST00000516095 111 ntBASIC3.57□□□□□ -1.84
NEFMP07197 AC004486.1-201ENST00000546846 233 ntBASIC3.57□□□□□ -1.84
NEFMP07197 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.57□□□□□ -1.84
NEFMP07197 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
NEFMP07197 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NEFMP07197 Y_RNA.24-201ENST00000362508 103 ntBASIC3.56□□□□□ -1.84
NEFMP07197 RNU6-1048P-201ENST00000364054 107 ntBASIC3.56□□□□□ -1.84
NEFMP07197 Y_RNA.310-201ENST00000365063 113 ntBASIC3.56□□□□□ -1.84
NEFMP07197 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.56□□□□□ -1.84
NEFMP07197 MTND4LP9-201ENST00000427694 174 ntBASIC3.56□□□□□ -1.84
NEFMP07197 AC092427.1-202ENST00000430569 476 ntBASIC3.56□□□□□ -1.84
NEFMP07197 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.56□□□□□ -1.84
NEFMP07197 RNU6-1007P-201ENST00000516586 107 ntBASIC3.56□□□□□ -1.84
NEFMP07197 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEFMP07197 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.56□□□□□ -1.84
NEFMP07197 AC068700.1-201ENST00000565862 3754 ntBASIC3.55□□□□□ -1.84
NEFMP07197 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEFMP07197 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NEFMP07197 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEFMP07197 AC062016.1-201ENST00000355719 319 ntBASIC3.55□□□□□ -1.84
NEFMP07197 Y_RNA.127-201ENST00000363386 109 ntBASIC3.55□□□□□ -1.84
NEFMP07197 RNU6-969P-201ENST00000383900 105 ntBASIC3.55□□□□□ -1.84
NEFMP07197 RNU6-144P-201ENST00000383951 107 ntBASIC3.55□□□□□ -1.84
NEFMP07197 AL139095.1-201ENST00000404326 391 ntBASIC3.55□□□□□ -1.84
NEFMP07197 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.55□□□□□ -1.84
NEFMP07197 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.55□□□□□ -1.84
NEFMP07197 AC103810.1-201ENST00000579873 453 ntBASIC3.55□□□□□ -1.84
NEFMP07197 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.55□□□□□ -1.84
NEFMP07197 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEFMP07197 RNU2-52P-201ENST00000410680 190 ntBASIC3.54□□□□□ -1.84
NEFMP07197 AC009414.1-201ENST00000427200 443 ntBASIC3.54□□□□□ -1.84
NEFMP07197 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
NEFMP07197 RNU7-141P-201ENST00000459304 62 ntBASIC3.54□□□□□ -1.84
NEFMP07197 HSPE1P18-201ENST00000517602 280 ntBASIC3.54□□□□□ -1.84
NEFMP07197 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.54□□□□□ -1.84
NEFMP07197 MIR3670-2-201ENST00000582974 65 ntBASIC3.54□□□□□ -1.84
NEFMP07197 MIR3670-1-201ENST00000584160 65 ntBASIC3.54□□□□□ -1.84
NEFMP07197 MIR3670-3-201ENST00000584855 65 ntBASIC3.54□□□□□ -1.84
NEFMP07197 AL359881.1-201ENST00000602916 267 ntBASIC3.54□□□□□ -1.84
NEFMP07197 RPL12P50-201ENST00000603116 116 ntBASIC3.54□□□□□ -1.84
NEFMP07197 MIR3670-4-201ENST00000612260 65 ntBASIC3.54□□□□□ -1.84
NEFMP07197 uc_338.14-201ENST00000613162 166 ntBASIC3.54□□□□□ -1.84
NEFMP07197 MIR3658-201ENST00000636291 56 ntBASIC3.54□□□□□ -1.84
NEFMP07197 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.54□□□□□ -1.84
NEFMP07197 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NEFMP07197 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NEFMP07197 SNORD114-7-201ENST00000362520 77 ntBASIC3.53□□□□□ -1.84
NEFMP07197 Y_RNA.353-201ENST00000365440 108 ntBASIC3.53□□□□□ -1.84
NEFMP07197 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NEFMP07197 SNORD116-14-201ENST00000383894 92 ntBASIC3.53□□□□□ -1.84
NEFMP07197 SNORD116-17-201ENST00000383929 92 ntBASIC3.53□□□□□ -1.84
NEFMP07197 SNORD116-15-201ENST00000384445 92 ntBASIC3.53□□□□□ -1.84
NEFMP07197 SNORD116-19-201ENST00000384729 92 ntBASIC3.53□□□□□ -1.84
NEFMP07197 MIR586-201ENST00000385035 97 ntBASIC3.53□□□□□ -1.84
NEFMP07197 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.53□□□□□ -1.84
NEFMP07197 AL121914.1-201ENST00000450188 156 ntBASIC3.53□□□□□ -1.84
NEFMP07197 RPS27P26-201ENST00000494583 239 ntBASIC3.53□□□□□ -1.84
NEFMP07197 SCARNA8-201ENST00000515924 131 ntBASIC3.53□□□□□ -1.84
NEFMP07197 RNU6-971P-201ENST00000516920 106 ntBASIC3.53□□□□□ -1.84
NEFMP07197 AC079598.5-201ENST00000547460 117 ntBASIC3.53□□□□□ -1.84
NEFMP07197 MIR4724-201ENST00000579485 89 ntBASIC3.53□□□□□ -1.84
NEFMP07197 MIR4635-201ENST00000583759 79 ntBASIC3.53□□□□□ -1.84
NEFMP07197 MIR4298-201ENST00000584380 73 ntBASIC3.53□□□□□ -1.84
NEFMP07197 AC006023.1-201ENST00000603944 259 ntBASIC3.53□□□□□ -1.84
NEFMP07197 AC025754.2-201ENST00000606491 432 ntBASIC3.53□□□□□ -1.84
NEFMP07197 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.53□□□□□ -1.84
NEFMP07197 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.53□□□□□ -1.85
NEFMP07197 MIR367-201ENST00000362299 68 ntBASIC3.52□□□□□ -1.85
NEFMP07197 Y_RNA.172-201ENST00000363765 102 ntBASIC3.52□□□□□ -1.85
NEFMP07197 SNORA25.6-201ENST00000364121 118 ntBASIC3.52□□□□□ -1.85
NEFMP07197 RNU6-643P-201ENST00000384018 107 ntBASIC3.52□□□□□ -1.85
NEFMP07197 MIR548B-201ENST00000385247 97 ntBASIC3.52□□□□□ -1.85
NEFMP07197 RNU6-1228P-201ENST00000391014 107 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AC006461.1-201ENST00000412637 326 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.52□□□□□ -1.85
NEFMP07197 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.52□□□□□ -1.85
NEFMP07197 AC245047.8-201ENST00000456455 284 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AC112771.1-201ENST00000463581 102 ntBASIC3.52□□□□□ -1.85
NEFMP07197 RNU6-1333P-201ENST00000516162 93 ntBASIC3.52□□□□□ -1.85
NEFMP07197 RNU6-453P-201ENST00000516819 85 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AC112693.2-201ENST00000556538 232 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.52□□□□□ -1.85
NEFMP07197 MIR5194-201ENST00000582634 120 ntBASIC3.52□□□□□ -1.85
NEFMP07197 TUG1_4.1-201ENST00000619464 181 ntBASIC3.52□□□□□ -1.85
NEFMP07197 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.52□□□□□ -1.85
NEFMP07197 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.52□□□□□ -1.85
NEFMP07197 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.51□□□□□ -1.85
NEFMP07197 snoU2_19.1-201ENST00000362361 80 ntBASIC3.51□□□□□ -1.85
NEFMP07197 Y_RNA.71-201ENST00000362892 104 ntBASIC3.51□□□□□ -1.85
NEFMP07197 RNA5SP393-201ENST00000363423 117 ntBASIC3.51□□□□□ -1.85
NEFMP07197 Y_RNA.261-201ENST00000364631 102 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms