Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 MTCO1P44-201ENST00000441935 243 ntBASIC1.83□□□□□ -2.12
RAF1P04049 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.83□□□□□ -2.12
RAF1P04049 RNU7-57P-201ENST00000459540 60 ntBASIC1.83□□□□□ -2.12
RAF1P04049 AC010531.2-201ENST00000465012 153 ntBASIC1.83□□□□□ -2.12
RAF1P04049 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.83□□□□□ -2.12
RAF1P04049 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.83□□□□□ -2.12
RAF1P04049 AL117187.1-201ENST00000555482 181 ntBASIC1.83□□□□□ -2.12
RAF1P04049 AC136932.1-201ENST00000574771 208 ntBASIC1.83□□□□□ -2.12
RAF1P04049 AL109918.3-201ENST00000603072 338 ntBASIC1.83□□□□□ -2.12
RAF1P04049 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RAF1P04049 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
RAF1P04049 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RAF1P04049 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
RAF1P04049 MIR410-201ENST00000362222 80 ntBASIC1.82□□□□□ -2.12
RAF1P04049 Y_RNA.26-201ENST00000362539 101 ntBASIC1.82□□□□□ -2.12
RAF1P04049 Y_RNA.133-201ENST00000363428 110 ntBASIC1.82□□□□□ -2.12
RAF1P04049 RNA5SP493-201ENST00000364115 91 ntBASIC1.82□□□□□ -2.12
RAF1P04049 Y_RNA.276-201ENST00000364732 109 ntBASIC1.82□□□□□ -2.12
RAF1P04049 RNU6-806P-201ENST00000365147 105 ntBASIC1.82□□□□□ -2.12
RAF1P04049 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.82□□□□□ -2.12
RAF1P04049 RNU6-1264P-201ENST00000383891 107 ntBASIC1.82□□□□□ -2.12
RAF1P04049 RNU6-937P-201ENST00000384325 106 ntBASIC1.82□□□□□ -2.12
RAF1P04049 RNU6-1109P-201ENST00000391187 107 ntBASIC1.82□□□□□ -2.12
RAF1P04049 AL512604.1-201ENST00000404812 257 ntBASIC1.82□□□□□ -2.12
RAF1P04049 RNU6-121P-201ENST00000410525 99 ntBASIC1.82□□□□□ -2.12
RAF1P04049 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.82□□□□□ -2.12
RAF1P04049 AC005002.2-201ENST00000438228 269 ntBASIC1.82□□□□□ -2.12
RAF1P04049 HMGN1P10-201ENST00000474557 553 ntBASIC1.82□□□□□ -2.12
RAF1P04049 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.82□□□□□ -2.12
RAF1P04049 AC087441.2-201ENST00000529141 262 ntBASIC1.82□□□□□ -2.12
RAF1P04049 MIR4423-201ENST00000580922 80 ntBASIC1.82□□□□□ -2.12
RAF1P04049 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
RAF1P04049 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
RAF1P04049 RNU1-17P-201ENST00000363022 152 ntBASIC1.81□□□□□ -2.12
RAF1P04049 Y_RNA.101-201ENST00000363154 102 ntBASIC1.81□□□□□ -2.12
RAF1P04049 RNU6-1309P-201ENST00000363305 108 ntBASIC1.81□□□□□ -2.12
RAF1P04049 Y_RNA.152-201ENST00000363578 100 ntBASIC1.81□□□□□ -2.12
RAF1P04049 RNU6-770P-201ENST00000363929 105 ntBASIC1.81□□□□□ -2.12
RAF1P04049 MIR1185-2-201ENST00000408687 86 ntBASIC1.81□□□□□ -2.12
RAF1P04049 AL445646.1-201ENST00000431784 216 ntBASIC1.81□□□□□ -2.12
RAF1P04049 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.81□□□□□ -2.12
RAF1P04049 AC114982.1-201ENST00000469402 321 ntBASIC1.81□□□□□ -2.12
RAF1P04049 RNU6-1053P-201ENST00000515930 101 ntBASIC1.81□□□□□ -2.12
RAF1P04049 RNU6-948P-201ENST00000516374 107 ntBASIC1.81□□□□□ -2.12
RAF1P04049 RNU6-635P-201ENST00000516651 102 ntBASIC1.81□□□□□ -2.12
RAF1P04049 Y_RNA.713-201ENST00000517013 96 ntBASIC1.81□□□□□ -2.12
RAF1P04049 AC008269.2-201ENST00000561915 1105 ntBASIC1.81□□□□□ -2.12
RAF1P04049 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.81□□□□□ -2.12
RAF1P04049 AL627230.6-201ENST00000611129 280 ntBASIC1.81□□□□□ -2.12
RAF1P04049 MIR6845-201ENST00000613182 61 ntBASIC1.81□□□□□ -2.12
RAF1P04049 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.81□□□□□ -2.12
RAF1P04049 AC004467.1-201ENST00000615678 330 ntBASIC1.81□□□□□ -2.12
RAF1P04049 MIR3674-201ENST00000636576 68 ntBASIC1.81□□□□□ -2.12
RAF1P04049 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RAF1P04049 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RAF1P04049 Y_RNA.19-201ENST00000362462 99 ntBASIC1.8□□□□□ -2.12
RAF1P04049 Y_RNA.64-201ENST00000362845 102 ntBASIC1.8□□□□□ -2.12
RAF1P04049 Y_RNA.222-201ENST00000364264 102 ntBASIC1.8□□□□□ -2.12
RAF1P04049 RNU6-454P-201ENST00000364292 107 ntBASIC1.8□□□□□ -2.12
RAF1P04049 SNORD63-201ENST00000384262 68 ntBASIC1.8□□□□□ -2.12
RAF1P04049 Y_RNA.462-201ENST00000384268 102 ntBASIC1.8□□□□□ -2.12
RAF1P04049 Y_RNA.512-201ENST00000384518 102 ntBASIC1.8□□□□□ -2.12
RAF1P04049 SNORD115-46-201ENST00000390982 71 ntBASIC1.8□□□□□ -2.12
RAF1P04049 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RAF1P04049 TOMM22P2-201ENST00000430735 237 ntBASIC1.8□□□□□ -2.12
RAF1P04049 MTND2P29-201ENST00000438595 412 ntBASIC1.8□□□□□ -2.12
RAF1P04049 AL353689.1-201ENST00000438895 199 ntBASIC1.8□□□□□ -2.12
RAF1P04049 LINC01399-202ENST00000458450 244 ntBASIC1.8□□□□□ -2.12
RAF1P04049 RNY3P15-201ENST00000516297 97 ntBASIC1.8□□□□□ -2.12
RAF1P04049 RNU6-966P-201ENST00000516479 104 ntBASIC1.8□□□□□ -2.12
RAF1P04049 SNORA40.15-201ENST00000516884 107 ntBASIC1.8□□□□□ -2.12
RAF1P04049 MIR4498-201ENST00000577599 66 ntBASIC1.8□□□□□ -2.12
RAF1P04049 MIR4300-201ENST00000581016 96 ntBASIC1.8□□□□□ -2.12
RAF1P04049 AC005176.2-201ENST00000596933 147 ntBASIC1.8□□□□□ -2.12
RAF1P04049 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.8□□□□□ -2.12
RAF1P04049 snoZ196.1-201ENST00000625269 89 ntBASIC1.8□□□□□ -2.12
RAF1P04049 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.8□□□□□ -2.12
RAF1P04049 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
RAF1P04049 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RAF1P04049 Y_RNA.230-201ENST00000364348 109 ntBASIC1.79□□□□□ -2.12
RAF1P04049 RNU6-1310P-201ENST00000384153 107 ntBASIC1.79□□□□□ -2.12
RAF1P04049 RNU6-1235P-201ENST00000384559 107 ntBASIC1.79□□□□□ -2.12
RAF1P04049 Y_RNA.570-201ENST00000384750 101 ntBASIC1.79□□□□□ -2.12
RAF1P04049 MIR568-201ENST00000385036 95 ntBASIC1.79□□□□□ -2.12
RAF1P04049 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RAF1P04049 RNA5SP475-201ENST00000410568 110 ntBASIC1.79□□□□□ -2.12
RAF1P04049 RNA5SP501-201ENST00000410990 112 ntBASIC1.79□□□□□ -2.12
RAF1P04049 RNU6-57P-201ENST00000411348 103 ntBASIC1.79□□□□□ -2.12
RAF1P04049 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.79□□□□□ -2.12
RAF1P04049 AL731563.1-201ENST00000442202 214 ntBASIC1.79□□□□□ -2.12
RAF1P04049 DYNLT3P2-201ENST00000442517 295 ntBASIC1.79□□□□□ -2.12
RAF1P04049 AL357134.1-201ENST00000445848 426 ntBASIC1.79□□□□□ -2.12
RAF1P04049 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.79□□□□□ -2.12
RAF1P04049 AC074290.1-201ENST00000448883 135 ntBASIC1.79□□□□□ -2.12
RAF1P04049 RPL23AP3-201ENST00000453844 468 ntBASIC1.79□□□□□ -2.12
RAF1P04049 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.79□□□□□ -2.12
RAF1P04049 RNU6-498P-201ENST00000459468 107 ntBASIC1.79□□□□□ -2.12
RAF1P04049 RNU6-221P-201ENST00000459541 99 ntBASIC1.79□□□□□ -2.12
RAF1P04049 AC098869.1-201ENST00000481627 292 ntBASIC1.79□□□□□ -2.12
RAF1P04049 MRPS17P9-201ENST00000511924 393 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms