Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.92□□□□□ -2.26
CDRT1O95170 Y_RNA.635-201ENST00000459041 101 ntBASIC0.92□□□□□ -2.26
CDRT1O95170 RPL30P7-201ENST00000479312 323 ntBASIC0.92□□□□□ -2.26
CDRT1O95170 RPL17P19-201ENST00000489069 552 ntBASIC0.92□□□□□ -2.26
CDRT1O95170 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.92□□□□□ -2.26
CDRT1O95170 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.92□□□□□ -2.26
CDRT1O95170 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.92□□□□□ -2.26
CDRT1O95170 AC027419.1-201ENST00000522976 328 ntBASIC0.92□□□□□ -2.26
CDRT1O95170 MIR4709-201ENST00000577272 72 ntBASIC0.92□□□□□ -2.26
CDRT1O95170 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.92□□□□□ -2.26
CDRT1O95170 MIR3937-201ENST00000580135 106 ntBASIC0.92□□□□□ -2.26
CDRT1O95170 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CDRT1O95170 AC021506.2-201ENST00000612354 169 ntBASIC0.92□□□□□ -2.26
CDRT1O95170 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.92□□□□□ -2.26
CDRT1O95170 AC099654.14-201ENST00000638599 341 ntBASIC0.92□□□□□ -2.26
CDRT1O95170 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
CDRT1O95170 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CDRT1O95170 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.91□□□□□ -2.26
CDRT1O95170 RNA5SP327-201ENST00000362494 101 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 RNU6-890P-201ENST00000384121 107 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 AC108667.1-201ENST00000428618 249 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.91□□□□□ -2.26
CDRT1O95170 UQCRBP2-201ENST00000447827 297 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 MTCO3P10-201ENST00000455912 772 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 RNU7-34P-201ENST00000459394 64 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 RNU6-107P-201ENST00000516643 102 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 RNU1-142P-201ENST00000516682 145 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 AC022868.1-201ENST00000517767 391 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 AC023157.2-201ENST00000540596 141 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.91□□□□□ -2.26
CDRT1O95170 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.91□□□□□ -2.26
CDRT1O95170 AC018448.1-201ENST00000552843 316 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 CYP3A52P-201ENST00000563326 91 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.91□□□□□ -2.26
CDRT1O95170 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.91□□□□□ -2.26
CDRT1O95170 MIR4438-201ENST00000585271 93 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 AL355073.2-201ENST00000612106 557 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 PISRT1.1-201ENST00000616930 107 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 AC087588.2-201ENST00000617667 426 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
CDRT1O95170 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.91□□□□□ -2.26
CDRT1O95170 MIR410-201ENST00000362222 80 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 RNU6-1301P-201ENST00000362724 104 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 RNU6-454P-201ENST00000364292 107 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 RNU6-879P-201ENST00000364328 108 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 Y_RNA.303-201ENST00000364998 94 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 SNORA20B-201ENST00000384220 132 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 SNORA75.6-201ENST00000391318 127 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 Y_RNA.595-201ENST00000410403 105 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 AC004965.1-201ENST00000413033 213 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 COX6CP10-201ENST00000416832 224 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 FTH1P12-201ENST00000432137 551 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 AC098614.3-201ENST00000438957 440 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 AC108210.2-201ENST00000503681 201 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.9□□□□□ -2.27
CDRT1O95170 SNORA40.9-201ENST00000515895 93 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 RNU7-99P-201ENST00000516271 62 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 RNU6-277P-201ENST00000516272 106 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 RN7SKP49-201ENST00000516675 260 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.9□□□□□ -2.27
CDRT1O95170 AL137100.2-201ENST00000555786 315 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 AC005899.2-201ENST00000584353 90 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 AC104260.1-201ENST00000616660 539 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 AL353997.5-201ENST00000618886 171 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 MIR8054-201ENST00000620877 86 ntBASIC0.9□□□□□ -2.27
CDRT1O95170 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CDRT1O95170 RNU6-1266P-201ENST00000362794 105 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 RNU1-22P-201ENST00000363334 158 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 SNORD116-29-201ENST00000384516 83 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 RNU6-1031P-201ENST00000384773 107 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 MRPS18CP6-201ENST00000423587 223 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.89□□□□□ -2.27
CDRT1O95170 RAB28P5-201ENST00000427490 651 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC245047.3-201ENST00000429428 127 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 DYNLT3P2-201ENST00000442517 295 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 RPS27P22-201ENST00000478056 241 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC010469.2-201ENST00000496412 480 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC105758.1-201ENST00000506038 399 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC022493.2-201ENST00000506122 481 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 PRDX4P1-201ENST00000507189 574 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC010598.1-201ENST00000510378 103 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.89□□□□□ -2.27
CDRT1O95170 AC097462.1-201ENST00000514125 324 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC015712.3-201ENST00000559380 164 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC055872.1-201ENST00000570978 278 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC005828.6-201ENST00000606610 232 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AL365434.2-201ENST00000607979 234 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC006435.5-201ENST00000624486 112 ntBASIC0.89□□□□□ -2.27
CDRT1O95170 AC073544.1-201ENST00000600110 1595 ntBASIC0.88□□□□□ -2.27
CDRT1O95170 SNORA27.1-201ENST00000362604 124 ntBASIC0.88□□□□□ -2.27
CDRT1O95170 Y_RNA.124-201ENST00000363339 93 ntBASIC0.88□□□□□ -2.27
CDRT1O95170 RNY3P11-201ENST00000364153 102 ntBASIC0.88□□□□□ -2.27
CDRT1O95170 Y_RNA.577-201ENST00000384794 101 ntBASIC0.88□□□□□ -2.27
CDRT1O95170 MRPL42P3-201ENST00000401492 326 ntBASIC0.88□□□□□ -2.27
CDRT1O95170 RPL23AP36-201ENST00000413895 458 ntBASIC0.88□□□□□ -2.27
CDRT1O95170 AP1B1P2-201ENST00000416196 106 ntBASIC0.88□□□□□ -2.27
CDRT1O95170 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.88□□□□□ -2.27
CDRT1O95170 BTF3P4-201ENST00000418852 495 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms