Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.68□□□□□ -1.98
CDKL5O76039 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CDKL5O76039 RNU6-944P-201ENST00000364023 107 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 RNU6-1305P-201ENST00000364353 104 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 Y_RNA.243-201ENST00000364481 109 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 Y_RNA.435-201ENST00000384095 112 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 RNU6-1274P-201ENST00000384557 107 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 MIR29B2-201ENST00000385055 81 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 RNU6-1248P-201ENST00000391096 64 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 AL357139.1-201ENST00000407792 426 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 RNU6-1328P-201ENST00000410938 106 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.67□□□□□ -1.98
CDKL5O76039 U8.19-201ENST00000459095 133 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 RNU6-1278P-201ENST00000516130 107 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 RNU5F-4P-201ENST00000516581 114 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 Y_RNA.703-201ENST00000516846 111 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.67□□□□□ -1.98
CDKL5O76039 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.67□□□□□ -1.98
CDKL5O76039 MRPS18CP4-201ENST00000535821 231 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 MIR5692C2-201ENST00000577959 77 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.67□□□□□ -1.98
CDKL5O76039 U2.22-201ENST00000636441 106 ntBASIC2.67□□□□□ -1.98
CDKL5O76039 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDKL5O76039 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDKL5O76039 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDKL5O76039 AL157777.2-201ENST00000258070 137 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 RNU6-486P-201ENST00000363116 107 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 Y_RNA.170-201ENST00000363746 110 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 RNU6-801P-201ENST00000364087 105 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 MIR586-201ENST00000385035 97 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 MIR524-201ENST00000385242 87 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 SNORA26.5-201ENST00000391215 123 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 AL392103.1-201ENST00000447000 198 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 HMGN2P9-201ENST00000476875 229 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 U6.115-201ENST00000636045 103 ntBASIC2.66□□□□□ -1.98
CDKL5O76039 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDKL5O76039 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CDKL5O76039 AC068700.1-201ENST00000565862 3754 ntBASIC2.65□□□□□ -1.98
CDKL5O76039 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.65□□□□□ -1.98
CDKL5O76039 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.65□□□□□ -1.98
CDKL5O76039 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
CDKL5O76039 Y_RNA.361-201ENST00000365515 120 ntBASIC2.65□□□□□ -1.99
CDKL5O76039 RNU6-804P-201ENST00000384286 107 ntBASIC2.65□□□□□ -1.99
CDKL5O76039 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.65□□□□□ -1.99
CDKL5O76039 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.65□□□□□ -1.99
CDKL5O76039 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.65□□□□□ -1.99
CDKL5O76039 SCARNA11.3-201ENST00000517276 130 ntBASIC2.65□□□□□ -1.99
CDKL5O76039 AC090616.3-201ENST00000582184 217 ntBASIC2.65□□□□□ -1.99
CDKL5O76039 AL713866.2-201ENST00000603579 219 ntBASIC2.65□□□□□ -1.99
CDKL5O76039 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.65□□□□□ -1.99
CDKL5O76039 AC104465.1-201ENST00000611365 139 ntBASIC2.65□□□□□ -1.99
CDKL5O76039 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.65□□□□□ -1.99
CDKL5O76039 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDKL5O76039 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDKL5O76039 MIRLET7G-201ENST00000362280 84 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 RNU6-1048P-201ENST00000364054 107 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 RPL30P4-201ENST00000429309 333 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.64□□□□□ -1.99
CDKL5O76039 AC091021.1-201ENST00000468051 388 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 RNU6-789P-201ENST00000517105 102 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 MTND5P41-201ENST00000517498 206 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 SUMO2P18-201ENST00000518873 252 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.64□□□□□ -1.99
CDKL5O76039 MIR3910-1-201ENST00000580936 111 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 RPL17P51-201ENST00000605218 238 ntBASIC2.64□□□□□ -1.99
CDKL5O76039 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDKL5O76039 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CDKL5O76039 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 SNORA67.4-201ENST00000384688 142 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 SNORA19-201ENST00000384737 128 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 Y_RNA.571-201ENST00000384753 98 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 MIR1185-2-201ENST00000408687 86 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 RNU5E-9P-201ENST00000411164 104 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 AC018634.1-201ENST00000437554 401 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 RNU7-14P-201ENST00000459331 62 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.63□□□□□ -1.99
CDKL5O76039 ATP5EP1-201ENST00000510257 156 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 AC136628.3-201ENST00000521868 290 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 AC100767.1-201ENST00000528178 123 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 AL078604.3-201ENST00000615580 211 ntBASIC2.63□□□□□ -1.99
CDKL5O76039 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDKL5O76039 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDKL5O76039 AC010329.5-201ENST00000623497 2174 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 Y_RNA.8-201ENST00000362353 102 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 RNU4-17P-201ENST00000365598 141 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 MIR1294-201ENST00000408503 142 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 RNU2-2P-201ENST00000410396 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 RNU6-394P-201ENST00000410735 107 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 RNU6-1135P-201ENST00000411083 103 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 RNA5SP281-201ENST00000516504 135 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.62□□□□□ -1.99
CDKL5O76039 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.62□□□□□ -1.99
CDKL5O76039 MIR3144-201ENST00000579460 79 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 RNU2-4P-201ENST00000606190 192 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.15-201ENST00000611544 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 MIR6840-201ENST00000611937 71 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.16-201ENST00000613119 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.12-201ENST00000613778 191 ntBASIC2.62□□□□□ -1.99
CDKL5O76039 U2.9-201ENST00000615427 191 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms