Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNU1-142P-201ENST00000516682 145 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 Y_RNA.702-201ENST00000516843 96 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 RNU7-4P-201ENST00000516961 62 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
CSDE1O75534 AL137100.2-201ENST00000555786 315 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 AL355375.2-201ENST00000574825 175 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 AC022432.1-201ENST00000595739 310 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 AL359075.3-201ENST00000613288 217 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 AL357075.2-201ENST00000614906 189 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CSDE1O75534 AC073544.1-201ENST00000600110 1595 ntBASIC1.47□□□□□ -2.17
CSDE1O75534 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
CSDE1O75534 MIR337-201ENST00000362281 93 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 Y_RNA.226-201ENST00000364337 114 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 SNORA63D-201ENST00000364359 132 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 Y_RNA.314-201ENST00000365114 102 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 RNU6-1264P-201ENST00000383891 107 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 RNU6-1145P-201ENST00000384246 107 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 Y_RNA.498-201ENST00000384460 102 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 RNY4P36-201ENST00000391116 96 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 RNU1-78P-201ENST00000391248 165 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 COX6CP10-201ENST00000416832 224 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.46□□□□□ -2.18
CSDE1O75534 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.46□□□□□ -2.18
CSDE1O75534 JTBP1-201ENST00000441314 247 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 PCNPP5-201ENST00000452246 481 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 RNU6-625P-201ENST00000459412 107 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 RNU7-169P-201ENST00000459456 61 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 RNU6-470P-201ENST00000515954 104 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 RNU6-507P-201ENST00000516045 100 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 RN7SKP49-201ENST00000516675 260 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 AC024995.1-201ENST00000523014 93 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 AC084781.2-201ENST00000615568 161 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.46□□□□□ -2.18
CSDE1O75534 AC100821.1-201ENST00000523153 2479 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 RNY1P10-201ENST00000363268 113 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 RNU6-392P-201ENST00000364926 101 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 SNORD12B-201ENST00000410433 91 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 Y_RNA.605-201ENST00000410577 105 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 MTCO2P27-201ENST00000420740 428 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 RPS29P29-201ENST00000456396 171 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 snoU13.27-201ENST00000459278 104 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 RNU7-34P-201ENST00000459394 64 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 RPL26P26-201ENST00000480251 434 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 HMGN1P7-201ENST00000491722 313 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 MIR2355-201ENST00000517199 87 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 AC144568.1-201ENST00000520139 137 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 AC018448.1-201ENST00000552843 316 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 AC080078.3-201ENST00000605407 463 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 Y_RNA.804-201ENST00000615262 101 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 AC091895.1-201ENST00000624494 256 ntBASIC1.45□□□□□ -2.18
CSDE1O75534 RNU6-1301P-201ENST00000362724 104 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 RNY3P11-201ENST00000364153 102 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 RNU6-203P-201ENST00000384038 104 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 RNU6-318P-201ENST00000384283 103 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 Y_RNA.529-201ENST00000384586 119 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 MIR628-201ENST00000385229 95 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 Y_RNA.592-201ENST00000410274 109 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.44□□□□□ -2.18
CSDE1O75534 MTND4P28-201ENST00000426217 387 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.44□□□□□ -2.18
CSDE1O75534 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.44□□□□□ -2.18
CSDE1O75534 Y_RNA.632-201ENST00000459189 102 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 RPS27P22-201ENST00000478056 241 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 AL163195.1-201ENST00000496941 348 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 AC074133.1-201ENST00000515696 183 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 SNORA40.9-201ENST00000515895 93 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 Y_RNA.718-201ENST00000517110 102 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 AC023157.2-201ENST00000540596 141 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 MIR8063-201ENST00000621930 81 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 ICE2P2-201ENST00000483823 2787 ntBASIC1.44□□□□□ -2.18
CSDE1O75534 Y_RNA.70-201ENST00000362886 110 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 SNORA4.2-201ENST00000365313 147 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 RNU6-926P-201ENST00000384075 107 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 SNORD116-29-201ENST00000384516 83 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 RNA5SP109-201ENST00000391010 116 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 ELOCP21-201ENST00000412558 336 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 MRPS18CP6-201ENST00000423587 223 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.43□□□□□ -2.18
CSDE1O75534 AC005002.2-201ENST00000438228 269 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 ELOCP24-201ENST00000456370 334 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 SNORD65B-201ENST00000459126 73 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.43□□□□□ -2.18
CSDE1O75534 MIR4709-201ENST00000577272 72 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 SNORA77B-201ENST00000578179 125 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 MIR4438-201ENST00000585271 93 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 AC087588.2-201ENST00000617667 426 ntBASIC1.43□□□□□ -2.18
CSDE1O75534 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 SNORD33-201ENST00000362761 85 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 RNU6-490P-201ENST00000362985 107 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 RNU6-271P-201ENST00000363858 105 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 Y_RNA.263-201ENST00000364659 114 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 RNU6-1040P-201ENST00000383974 107 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 RNY3P14-201ENST00000384309 102 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CSDE1O75534 RNA5SP475-201ENST00000410568 110 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 RAB28P5-201ENST00000427490 651 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 AC099799.1-201ENST00000439809 192 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms