Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNU7-116P-201ENST00000516940 62 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 MIR4724-201ENST00000579485 89 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.34□□□□□ -1.87
PRPF40AO75400 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PRPF40AO75400 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PRPF40AO75400 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF40AO75400 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF40AO75400 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF40AO75400 RNU6-103P-201ENST00000363686 107 ntBASIC3.33□□□□□ -1.88
PRPF40AO75400 SNORA36B-201ENST00000410438 131 ntBASIC3.33□□□□□ -1.88
PRPF40AO75400 AL135786.1-201ENST00000415892 214 ntBASIC3.33□□□□□ -1.88
PRPF40AO75400 UBBP3-201ENST00000445497 241 ntBASIC3.33□□□□□ -1.88
PRPF40AO75400 RPS29P21-201ENST00000496272 170 ntBASIC3.33□□□□□ -1.88
PRPF40AO75400 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF40AO75400 RNU6-255P-201ENST00000516957 105 ntBASIC3.33□□□□□ -1.88
PRPF40AO75400 AC107016.2-201ENST00000547968 190 ntBASIC3.33□□□□□ -1.88
PRPF40AO75400 POLR3GP1-201ENST00000594073 261 ntBASIC3.33□□□□□ -1.88
PRPF40AO75400 AP003357.1-201ENST00000604497 148 ntBASIC3.33□□□□□ -1.88
PRPF40AO75400 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF40AO75400 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.32□□□□□ -1.88
PRPF40AO75400 RNU6-969P-201ENST00000383900 105 ntBASIC3.32□□□□□ -1.88
PRPF40AO75400 RNU6-1323P-201ENST00000384025 107 ntBASIC3.32□□□□□ -1.88
PRPF40AO75400 SNORA54-201ENST00000384281 123 ntBASIC3.32□□□□□ -1.88
PRPF40AO75400 RPL39P40-201ENST00000445481 146 ntBASIC3.32□□□□□ -1.88
PRPF40AO75400 RPS27AP9-201ENST00000477681 438 ntBASIC3.32□□□□□ -1.88
PRPF40AO75400 RPL23AP54-201ENST00000495129 419 ntBASIC3.32□□□□□ -1.88
PRPF40AO75400 AC008885.1-201ENST00000514930 301 ntBASIC3.32□□□□□ -1.88
PRPF40AO75400 AC104465.1-201ENST00000611365 139 ntBASIC3.32□□□□□ -1.88
PRPF40AO75400 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF40AO75400 AC068700.1-201ENST00000565862 3754 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF40AO75400 Y_RNA.99-201ENST00000363138 105 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 RNU6-774P-201ENST00000363238 107 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 RNU6-746P-201ENST00000384112 109 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 RNU6-376P-201ENST00000384731 106 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 SNORA26.7-201ENST00000391288 122 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 AC060773.1-201ENST00000421698 310 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 S100A11P2-201ENST00000467589 312 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 AC097462.1-201ENST00000514125 324 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 RNU7-172P-201ENST00000517125 64 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 NDUFA5P6-201ENST00000542110 379 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 AC127455.1-201ENST00000565496 145 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF40AO75400 MIR5688-201ENST00000580619 83 ntBASIC3.31□□□□□ -1.88
PRPF40AO75400 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PRPF40AO75400 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PRPF40AO75400 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.3□□□□□ -1.88
PRPF40AO75400 MIR340-201ENST00000362125 95 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 Y_RNA.75-201ENST00000362927 97 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 RNU1-22P-201ENST00000363334 158 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 Y_RNA.412-201ENST00000384001 104 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 RNA5SP511-201ENST00000410487 115 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 AC011406.1-201ENST00000512440 370 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 RNU6-1007P-201ENST00000516586 107 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 MIR4744-201ENST00000581563 82 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 U2.20-201ENST00000613956 192 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 AC021753.1-201ENST00000635724 168 ntBASIC3.3□□□□□ -1.88
PRPF40AO75400 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PRPF40AO75400 Y_RNA.8-201ENST00000362353 102 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 snoU2_19.4-201ENST00000364329 80 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 SNORA71.1-201ENST00000364523 117 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 RNU6-312P-201ENST00000364629 107 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 RNU6-117P-201ENST00000365415 107 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 Y_RNA.357-201ENST00000365487 109 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 RNU6-136P-201ENST00000384663 107 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 EDDM3CP-201ENST00000415977 425 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 AL162725.1-201ENST00000435405 301 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 AC003982.1-202ENST00000469928 248 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 AC015720.1-201ENST00000565251 277 ntBASIC3.29□□□□□ -1.88
PRPF40AO75400 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.29□□□□□ -1.88
PRPF40AO75400 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.29□□□□□ -1.88
PRPF40AO75400 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.29□□□□□ -1.88
PRPF40AO75400 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PRPF40AO75400 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PRPF40AO75400 AC245060.5-201ENST00000610778 3293 ntBASIC3.28□□□□□ -1.88
PRPF40AO75400 Y_RNA.23-201ENST00000362496 106 ntBASIC3.28□□□□□ -1.88
PRPF40AO75400 RNU6-275P-201ENST00000364910 107 ntBASIC3.28□□□□□ -1.88
PRPF40AO75400 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.28□□□□□ -1.88
PRPF40AO75400 RNU6-160P-201ENST00000384591 107 ntBASIC3.28□□□□□ -1.88
PRPF40AO75400 Y_RNA.572-201ENST00000384757 98 ntBASIC3.28□□□□□ -1.88
PRPF40AO75400 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.28□□□□□ -1.88
PRPF40AO75400 AC245102.2-201ENST00000448956 180 ntBASIC3.28□□□□□ -1.88
PRPF40AO75400 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.28□□□□□ -1.88
PRPF40AO75400 AC245047.8-201ENST00000456455 284 ntBASIC3.28□□□□□ -1.88
PRPF40AO75400 Y_RNA.703-201ENST00000516846 111 ntBASIC3.28□□□□□ -1.88
PRPF40AO75400 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PRPF40AO75400 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF40AO75400 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF40AO75400 MAPK10-266ENST00000641066 6555 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 snoU2-30.2-201ENST00000362805 70 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 SNORD56.5-201ENST00000364281 72 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 RNU6-804P-201ENST00000384286 107 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 RNU6-417P-201ENST00000384712 107 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 MIR616-201ENST00000385293 97 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 RNU6-383P-201ENST00000410864 94 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.27□□□□□ -1.89
PRPF40AO75400 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.27□□□□□ -1.89
PRPF40AO75400 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF40AO75400 RNU6-437P-201ENST00000459408 95 ntBASIC3.27□□□□□ -1.89
PRPF40AO75400 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 232.1 ms