Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR3121-201ENST00000579680 77 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCD1O75127 uc_338.28-201ENST00000612082 187 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 U6.95-201ENST00000636931 70 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 MIR7515-201ENST00000637837 67 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 CENPCP1-201ENST00000533085 2578 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCD1O75127 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTCD1O75127 AC062016.1-201ENST00000355719 319 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 U8.1-201ENST00000362843 134 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 RNU6-508P-201ENST00000363231 103 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 RNU6-975P-201ENST00000384296 105 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 SNORD116-21-201ENST00000384507 92 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 SNORA75.5-201ENST00000391291 81 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 RNA5SP184-201ENST00000411071 108 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 RPS12P18-201ENST00000442381 270 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCD1O75127 AL109933.2-201ENST00000452651 260 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 AC079600.2-201ENST00000550076 130 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 MIR3199-1-201ENST00000582434 88 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 AL670379.3-201ENST00000605040 251 ntBASIC3.81□□□□□ -1.8
PTCD1O75127 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.81□□□□□ -1.8
PTCD1O75127 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCD1O75127 RNU6-271P-201ENST00000363858 105 ntBASIC3.8□□□□□ -1.8
PTCD1O75127 RNU6-438P-201ENST00000365561 103 ntBASIC3.8□□□□□ -1.8
PTCD1O75127 SNORD116-13-201ENST00000384408 92 ntBASIC3.8□□□□□ -1.8
PTCD1O75127 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.8□□□□□ -1.8
PTCD1O75127 SNORD65B-201ENST00000459126 73 ntBASIC3.8□□□□□ -1.8
PTCD1O75127 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCD1O75127 MIR548AY-201ENST00000617669 107 ntBASIC3.8□□□□□ -1.8
PTCD1O75127 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
PTCD1O75127 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCD1O75127 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCD1O75127 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD1O75127 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCD1O75127 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.79□□□□□ -1.8
PTCD1O75127 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTCD1O75127 SNORD31B-201ENST00000364977 69 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 RNU6-32P-201ENST00000383948 107 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 RNU6-144P-201ENST00000383951 107 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 RNU6-13P-201ENST00000384248 107 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 RNU6-12P-201ENST00000384604 107 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 RNU6-41P-201ENST00000384741 107 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 RNU6-1228P-201ENST00000391014 107 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 RNU6-1328P-201ENST00000410938 106 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 AL158147.1-201ENST00000443970 75 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 AC090515.1-201ENST00000465295 476 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 AC104027.1-201ENST00000521887 300 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 RMST_8.1-201ENST00000610287 165 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 AC013412.1-201ENST00000610687 192 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 AC073476.4-201ENST00000628409 72 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 U6.98-201ENST00000637157 84 ntBASIC3.79□□□□□ -1.8
PTCD1O75127 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
PTCD1O75127 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PTCD1O75127 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCD1O75127 SNORD114-7-201ENST00000362520 77 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 SNORA27.1-201ENST00000362604 124 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 RNU6-728P-201ENST00000365375 104 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 MLLT10P1-201ENST00000418346 262 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCD1O75127 AC087499.2-201ENST00000432861 149 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCD1O75127 RNU6-221P-201ENST00000459541 99 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCD1O75127 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCD1O75127 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCD1O75127 AC010598.1-201ENST00000510378 103 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 Y_RNA.677-201ENST00000516401 85 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 RNU6-1061P-201ENST00000516530 99 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 AC107294.3-201ENST00000609211 526 ntBASIC3.78□□□□□ -1.8
PTCD1O75127 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCD1O75127 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCD1O75127 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCD1O75127 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTCD1O75127 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PTCD1O75127 MIR423-201ENST00000362201 94 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 RNU4-82P-201ENST00000362443 140 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 RNU6-418P-201ENST00000384035 107 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 RNU6-905P-201ENST00000384434 107 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 RNU6-851P-201ENST00000384565 107 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PTCD1O75127 Y_RNA.584-201ENST00000391090 114 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 SNORA36B-201ENST00000410438 131 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 Y_RNA.622-201ENST00000411091 108 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 RPS26P55-201ENST00000471178 356 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 RNU6-781P-201ENST00000516377 101 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 RNU7-115P-201ENST00000516433 55 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 SCARNA3-201ENST00000517097 143 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 RNU6-762P-201ENST00000517107 102 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PTCD1O75127 AC133485.4-201ENST00000561835 220 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 AC138907.4-201ENST00000570107 226 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 AC105245.1-201ENST00000581934 244 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PTCD1O75127 XIST_intron.1-201ENST00000619444 68 ntBASIC3.77□□□□□ -1.81
PTCD1O75127 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCD1O75127 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCD1O75127 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCD1O75127 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTCD1O75127 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms