Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC139713.2-215ENST00000641428 5037 ntBASIC3.87□□□□□ -1.79
GFRA3O60609 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
GFRA3O60609 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
GFRA3O60609 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.87□□□□□ -1.79
GFRA3O60609 SNORD115-14-201ENST00000363090 81 ntBASIC3.87□□□□□ -1.79
GFRA3O60609 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.87□□□□□ -1.79
GFRA3O60609 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.87□□□□□ -1.79
GFRA3O60609 AC087499.4-201ENST00000448505 178 ntBASIC3.87□□□□□ -1.79
GFRA3O60609 AC233266.1-201ENST00000454518 96 ntBASIC3.87□□□□□ -1.79
GFRA3O60609 MIR449C-201ENST00000516047 92 ntBASIC3.87□□□□□ -1.79
GFRA3O60609 MIR432-201ENST00000606207 94 ntBASIC3.87□□□□□ -1.79
GFRA3O60609 AC242852.1-201ENST00000612151 96 ntBASIC3.87□□□□□ -1.79
GFRA3O60609 AC244015.1-201ENST00000622301 99 ntBASIC3.87□□□□□ -1.79
GFRA3O60609 MIR3199-2-201ENST00000636243 86 ntBASIC3.87□□□□□ -1.79
GFRA3O60609 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
GFRA3O60609 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
GFRA3O60609 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
GFRA3O60609 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
GFRA3O60609 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
GFRA3O60609 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.87□□□□□ -1.79
GFRA3O60609 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
GFRA3O60609 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
GFRA3O60609 AC092881.1-201ENST00000638218 2733 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA3O60609 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
GFRA3O60609 RNU1-33P-201ENST00000364249 162 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 RNU6-1235P-201ENST00000384559 107 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 RNU6-748P-201ENST00000384648 107 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 RNU6-1307P-201ENST00000391012 103 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 RNU6-663P-201ENST00000391105 106 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 ATP5A1P2-201ENST00000412323 255 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 RNU6-498P-201ENST00000459468 107 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 MIR4484-201ENST00000582855 83 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 AC006023.1-201ENST00000603944 259 ntBASIC3.86□□□□□ -1.79
GFRA3O60609 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA3O60609 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA3O60609 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA3O60609 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
GFRA3O60609 MIR493-201ENST00000385254 89 ntBASIC3.85□□□□□ -1.79
GFRA3O60609 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.85□□□□□ -1.79
GFRA3O60609 MIR4672-201ENST00000583126 81 ntBASIC3.85□□□□□ -1.79
GFRA3O60609 AL137849.1-201ENST00000604767 169 ntBASIC3.85□□□□□ -1.79
GFRA3O60609 AC006065.5-201ENST00000623427 349 ntBASIC3.85□□□□□ -1.79
GFRA3O60609 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA3O60609 SCN1A-220ENST00000641603 12506 ntBASIC3.85□□□□□ -1.79
GFRA3O60609 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA3O60609 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GFRA3O60609 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.85□□□□□ -1.79
GFRA3O60609 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.85□□□□□ -1.79
GFRA3O60609 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA3O60609 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA3O60609 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
GFRA3O60609 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.84□□□□□ -1.79
GFRA3O60609 RNU6-161P-201ENST00000363051 106 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 SNORD35B-201ENST00000363660 87 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 SNORA80A-201ENST00000363922 136 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 RNU6-335P-201ENST00000364563 113 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 SNORD115-31-201ENST00000365318 82 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 SNORD96B-201ENST00000386148 79 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
GFRA3O60609 RNU6-205P-201ENST00000390858 107 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 MIR1911-201ENST00000410783 80 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 DBIP2-201ENST00000419076 262 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 SNORD105B-201ENST00000458770 79 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 AC114811.1-201ENST00000507207 168 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 RNU6-237P-201ENST00000515985 71 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 RNU6-1291P-201ENST00000516591 104 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 RNA5SP33-201ENST00000516687 98 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 Y_RNA.714-201ENST00000517065 90 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 RNU7-156P-201ENST00000517214 74 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.84□□□□□ -1.79
GFRA3O60609 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.84□□□□□ -1.79
GFRA3O60609 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.84□□□□□ -1.79
GFRA3O60609 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.84□□□□□ -1.79
GFRA3O60609 AP001005.3-201ENST00000622049 129 ntBASIC3.84□□□□□ -1.79
GFRA3O60609 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.84□□□□□ -1.8
GFRA3O60609 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
GFRA3O60609 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.83□□□□□ -1.8
GFRA3O60609 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
GFRA3O60609 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA3O60609 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA3O60609 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
GFRA3O60609 AC005332.5-201ENST00000591222 2919 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA3O60609 RNU6-442P-201ENST00000383968 104 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 Z74021.1-201ENST00000423610 407 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 SPINT5P-201ENST00000448174 155 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 snoU13.11-201ENST00000459219 104 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 RNU2-27P-201ENST00000516185 142 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 AC007536.1-201ENST00000533382 349 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 YPEL5P3-201ENST00000547227 352 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 AC069240.1-201ENST00000548774 375 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 RPL12P50-201ENST00000603116 116 ntBASIC3.83□□□□□ -1.8
GFRA3O60609 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA3O60609 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA3O60609 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA3O60609 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GFRA3O60609 MAPK10-303ENST00000641324 3959 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms