Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA2O43364 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA2O43364 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HOXA2O43364 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4□□□□□ -1.77
HOXA2O43364 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXA2O43364 SNORA9-201ENST00000384215 133 ntBASIC4□□□□□ -1.77
HOXA2O43364 RNU6-49P-201ENST00000384256 107 ntBASIC4□□□□□ -1.77
HOXA2O43364 MIR802-201ENST00000390235 94 ntBASIC4□□□□□ -1.77
HOXA2O43364 AL117342.1-201ENST00000404861 406 ntBASIC4□□□□□ -1.77
HOXA2O43364 RNA5SP146-201ENST00000410743 123 ntBASIC4□□□□□ -1.77
HOXA2O43364 AC244505.4-201ENST00000434905 287 ntBASIC4□□□□□ -1.77
HOXA2O43364 AL161788.1-201ENST00000441805 169 ntBASIC4□□□□□ -1.77
HOXA2O43364 SSXP5-201ENST00000443473 287 ntBASIC4□□□□□ -1.77
HOXA2O43364 RPS26P48-201ENST00000491713 339 ntBASIC4□□□□□ -1.77
HOXA2O43364 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4□□□□□ -1.77
HOXA2O43364 AC093259.1-201ENST00000509755 300 ntBASIC4□□□□□ -1.77
HOXA2O43364 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4□□□□□ -1.77
HOXA2O43364 RN7SKP43-201ENST00000516173 320 ntBASIC4□□□□□ -1.77
HOXA2O43364 SNORA70.24-201ENST00000517233 118 ntBASIC4□□□□□ -1.77
HOXA2O43364 IGKV3-31-201ENST00000523109 329 ntBASIC4□□□□□ -1.77
HOXA2O43364 MIR3922-201ENST00000585192 84 ntBASIC4□□□□□ -1.77
HOXA2O43364 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HOXA2O43364 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4□□□□□ -1.77
HOXA2O43364 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
HOXA2O43364 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HOXA2O43364 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXA2O43364 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HOXA2O43364 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA2O43364 RNA5SP50-201ENST00000363731 107 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 Y_RNA.332-201ENST00000365271 113 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 MIR491-201ENST00000384877 84 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 MIR181B1-201ENST00000385240 110 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 MICF-203ENST00000432679 129 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 CKS1BP2-201ENST00000497342 240 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA2O43364 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA2O43364 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA2O43364 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 MIR5739-201ENST00000619803 80 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 AC110079.1-202ENST00000635213 138 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 ZNF271P-202ENST00000465539 1970 ntBASIC3.99□□□□□ -1.77
HOXA2O43364 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
HOXA2O43364 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA2O43364 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA2O43364 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA2O43364 snoU2-30.2-201ENST00000362805 70 ntBASIC3.98□□□□□ -1.77
HOXA2O43364 MIR518F-201ENST00000384973 87 ntBASIC3.98□□□□□ -1.77
HOXA2O43364 RNU6-440P-201ENST00000390882 105 ntBASIC3.98□□□□□ -1.77
HOXA2O43364 AC060773.1-201ENST00000421698 310 ntBASIC3.98□□□□□ -1.77
HOXA2O43364 SCGB1D5P-201ENST00000515134 247 ntBASIC3.98□□□□□ -1.77
HOXA2O43364 SCARNA3-201ENST00000517097 143 ntBASIC3.98□□□□□ -1.77
HOXA2O43364 RNU6-762P-201ENST00000517107 102 ntBASIC3.98□□□□□ -1.77
HOXA2O43364 AL358944.1-201ENST00000528537 144 ntBASIC3.98□□□□□ -1.77
HOXA2O43364 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA2O43364 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA2O43364 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HOXA2O43364 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA2O43364 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA2O43364 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA2O43364 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA2O43364 MIR126-201ENST00000362291 85 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 SNORD9-201ENST00000362566 104 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 RNU6-414P-201ENST00000363705 104 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 Y_RNA.267-201ENST00000364679 109 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 Y_RNA.362-201ENST00000365518 110 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 MIR218-1-201ENST00000384999 110 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA2O43364 RNU6-991P-201ENST00000516168 107 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 RNU6-341P-201ENST00000516973 96 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 MIR5195-201ENST00000583555 115 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 AL359075.3-201ENST00000613288 217 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 MIR6079-201ENST00000635807 62 ntBASIC3.97□□□□□ -1.77
HOXA2O43364 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA2O43364 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA2O43364 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA2O43364 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA2O43364 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA2O43364 RNU6-690P-201ENST00000365242 106 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 Y_RNA.388-201ENST00000383919 113 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 Y_RNA.410-201ENST00000383992 113 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 FO393413.1-201ENST00000402892 195 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 RPS3AP1-201ENST00000413190 320 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 CYP2C59P-201ENST00000457790 269 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 AC021205.2-201ENST00000480069 347 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 RNA5SP208-201ENST00000516156 78 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 RNY4P20-201ENST00000516678 93 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 MIR3199-1-201ENST00000582434 88 ntBASIC3.96□□□□□ -1.78
HOXA2O43364 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXA2O43364 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA2O43364 MAPK10-253ENST00000641010 4072 ntBASIC3.95□□□□□ -1.78
HOXA2O43364 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA2O43364 RNVU1-14-201ENST00000384770 164 ntBASIC3.95□□□□□ -1.78
HOXA2O43364 SNORA48.8-201ENST00000391324 134 ntBASIC3.95□□□□□ -1.78
HOXA2O43364 RN7SL601P-201ENST00000471221 293 ntBASIC3.95□□□□□ -1.78
HOXA2O43364 SNORA74D-201ENST00000516404 141 ntBASIC3.95□□□□□ -1.78
HOXA2O43364 RNU7-128P-201ENST00000517247 62 ntBASIC3.95□□□□□ -1.78
HOXA2O43364 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA2O43364 Y_RNA.818-201ENST00000618813 71 ntBASIC3.95□□□□□ -1.78
HOXA2O43364 AC134878.1-201ENST00000619901 243 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms