Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 U2.1-201ENST00000618978 145 ntBASIC1.53□□□□□ -2.16
E2F3O00716 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.53□□□□□ -2.16
E2F3O00716 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.53□□□□□ -2.16
E2F3O00716 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.17
E2F3O00716 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
E2F3O00716 AC006026.1-201ENST00000444025 1803 ntBASIC1.52□□□□□ -2.17
E2F3O00716 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
E2F3O00716 RNU6-1301P-201ENST00000362724 104 ntBASIC1.52□□□□□ -2.17
E2F3O00716 RNU6-862P-201ENST00000362804 105 ntBASIC1.52□□□□□ -2.17
E2F3O00716 Y_RNA.118-201ENST00000363300 101 ntBASIC1.52□□□□□ -2.17
E2F3O00716 Y_RNA.197-201ENST00000364004 102 ntBASIC1.52□□□□□ -2.17
E2F3O00716 Y_RNA.813-201ENST00000364639 102 ntBASIC1.52□□□□□ -2.17
E2F3O00716 RNU6-926P-201ENST00000384075 107 ntBASIC1.52□□□□□ -2.17
E2F3O00716 Y_RNA.460-201ENST00000384255 102 ntBASIC1.52□□□□□ -2.17
E2F3O00716 RNU6-318P-201ENST00000384283 103 ntBASIC1.52□□□□□ -2.17
E2F3O00716 MIR1185-2-201ENST00000408687 86 ntBASIC1.52□□□□□ -2.17
E2F3O00716 RNU2-7P-201ENST00000410794 178 ntBASIC1.52□□□□□ -2.17
E2F3O00716 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
E2F3O00716 NDUFB4P10-201ENST00000452541 359 ntBASIC1.52□□□□□ -2.17
E2F3O00716 RNU6-976P-201ENST00000516086 111 ntBASIC1.52□□□□□ -2.17
E2F3O00716 AK6P2-201ENST00000549020 471 ntBASIC1.52□□□□□ -2.17
E2F3O00716 AC006600.1-201ENST00000572529 153 ntBASIC1.52□□□□□ -2.17
E2F3O00716 AC092447.9-201ENST00000603395 144 ntBASIC1.52□□□□□ -2.17
E2F3O00716 AC069114.2-201ENST00000604699 304 ntBASIC1.52□□□□□ -2.17
E2F3O00716 AP001485.1-201ENST00000604799 199 ntBASIC1.52□□□□□ -2.17
E2F3O00716 AL080274.1-201ENST00000605565 220 ntBASIC1.52□□□□□ -2.17
E2F3O00716 AL050343.2-201ENST00000607338 280 ntBASIC1.52□□□□□ -2.17
E2F3O00716 AL512598.1-201ENST00000610158 273 ntBASIC1.52□□□□□ -2.17
E2F3O00716 AC090971.5-201ENST00000621102 293 ntBASIC1.52□□□□□ -2.17
E2F3O00716 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
E2F3O00716 MIR369-201ENST00000362155 70 ntBASIC1.51□□□□□ -2.17
E2F3O00716 RNU6-1115P-201ENST00000362490 106 ntBASIC1.51□□□□□ -2.17
E2F3O00716 RNU6-1266P-201ENST00000362794 105 ntBASIC1.51□□□□□ -2.17
E2F3O00716 Y_RNA.269-201ENST00000364685 89 ntBASIC1.51□□□□□ -2.17
E2F3O00716 RNU6-1240P-201ENST00000365155 104 ntBASIC1.51□□□□□ -2.17
E2F3O00716 MIR520A-201ENST00000384862 85 ntBASIC1.51□□□□□ -2.17
E2F3O00716 RNA5SP475-201ENST00000410568 110 ntBASIC1.51□□□□□ -2.17
E2F3O00716 EBAG9P1-201ENST00000418955 543 ntBASIC1.51□□□□□ -2.17
E2F3O00716 AC008134.1-201ENST00000420943 193 ntBASIC1.51□□□□□ -2.17
E2F3O00716 HMGN2P34-201ENST00000437647 269 ntBASIC1.51□□□□□ -2.17
E2F3O00716 RNU6-221P-201ENST00000459541 99 ntBASIC1.51□□□□□ -2.17
E2F3O00716 AC074133.1-201ENST00000515696 183 ntBASIC1.51□□□□□ -2.17
E2F3O00716 RNU6-1146P-201ENST00000516282 102 ntBASIC1.51□□□□□ -2.17
E2F3O00716 AL442163.3-201ENST00000554110 156 ntBASIC1.51□□□□□ -2.17
E2F3O00716 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
E2F3O00716 AC006157.1-201ENST00000611750 366 ntBASIC1.51□□□□□ -2.17
E2F3O00716 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.51□□□□□ -2.17
E2F3O00716 AL357075.2-201ENST00000614906 189 ntBASIC1.51□□□□□ -2.17
E2F3O00716 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.51□□□□□ -2.17
E2F3O00716 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
E2F3O00716 Y_RNA.5-201ENST00000362334 102 ntBASIC1.5□□□□□ -2.17
E2F3O00716 Y_RNA.39-201ENST00000362620 98 ntBASIC1.5□□□□□ -2.17
E2F3O00716 RNU1-96P-201ENST00000364163 162 ntBASIC1.5□□□□□ -2.17
E2F3O00716 Y_RNA.796-201ENST00000364268 102 ntBASIC1.5□□□□□ -2.17
E2F3O00716 Y_RNA.799-201ENST00000364992 102 ntBASIC1.5□□□□□ -2.17
E2F3O00716 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
E2F3O00716 RNU1-78P-201ENST00000391248 165 ntBASIC1.5□□□□□ -2.17
E2F3O00716 AC099677.2-201ENST00000436385 175 ntBASIC1.5□□□□□ -2.17
E2F3O00716 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
E2F3O00716 RNU6-625P-201ENST00000459412 107 ntBASIC1.5□□□□□ -2.17
E2F3O00716 RPL36AP21-201ENST00000490372 323 ntBASIC1.5□□□□□ -2.17
E2F3O00716 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.5□□□□□ -2.17
E2F3O00716 SNORA40.9-201ENST00000515895 93 ntBASIC1.5□□□□□ -2.17
E2F3O00716 AC025647.1-201ENST00000517879 253 ntBASIC1.5□□□□□ -2.17
E2F3O00716 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.5□□□□□ -2.17
E2F3O00716 AC018448.1-201ENST00000552843 316 ntBASIC1.5□□□□□ -2.17
E2F3O00716 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.5□□□□□ -2.17
E2F3O00716 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.5□□□□□ -2.17
E2F3O00716 VN1R91P-201ENST00000594377 169 ntBASIC1.5□□□□□ -2.17
E2F3O00716 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
E2F3O00716 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
E2F3O00716 RNU6-271P-201ENST00000363858 105 ntBASIC1.49□□□□□ -2.17
E2F3O00716 Y_RNA.252-201ENST00000364556 101 ntBASIC1.49□□□□□ -2.17
E2F3O00716 Y_RNA.355-201ENST00000365462 98 ntBASIC1.49□□□□□ -2.17
E2F3O00716 Y_RNA.535-201ENST00000384612 99 ntBASIC1.49□□□□□ -2.17
E2F3O00716 RNU6-417P-201ENST00000384712 107 ntBASIC1.49□□□□□ -2.17
E2F3O00716 MIR517C-201ENST00000385103 95 ntBASIC1.49□□□□□ -2.17
E2F3O00716 ELOCP21-201ENST00000412558 336 ntBASIC1.49□□□□□ -2.17
E2F3O00716 AC004965.1-201ENST00000413033 213 ntBASIC1.49□□□□□ -2.17
E2F3O00716 MTCO3P19-201ENST00000415864 321 ntBASIC1.49□□□□□ -2.17
E2F3O00716 HSPE1P9-201ENST00000440046 311 ntBASIC1.49□□□□□ -2.17
E2F3O00716 JTBP1-201ENST00000441314 247 ntBASIC1.49□□□□□ -2.17
E2F3O00716 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.49□□□□□ -2.17
E2F3O00716 RPL26P26-201ENST00000480251 434 ntBASIC1.49□□□□□ -2.17
E2F3O00716 RNU6-408P-201ENST00000515910 100 ntBASIC1.49□□□□□ -2.17
E2F3O00716 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.49□□□□□ -2.17
E2F3O00716 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.49□□□□□ -2.17
E2F3O00716 SNORA77B-201ENST00000578179 125 ntBASIC1.49□□□□□ -2.17
E2F3O00716 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.49□□□□□ -2.17
E2F3O00716 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.49□□□□□ -2.17
E2F3O00716 AL160413.1-201ENST00000622780 310 ntBASIC1.49□□□□□ -2.17
E2F3O00716 AC138305.3-201ENST00000624988 240 ntBASIC1.49□□□□□ -2.17
E2F3O00716 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
E2F3O00716 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
E2F3O00716 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
E2F3O00716 Y_RNA.445-201ENST00000384168 102 ntBASIC1.48□□□□□ -2.17
E2F3O00716 RNU6-708P-201ENST00000384217 107 ntBASIC1.48□□□□□ -2.17
E2F3O00716 Y_RNA.496-201ENST00000384444 101 ntBASIC1.48□□□□□ -2.17
E2F3O00716 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.48□□□□□ -2.17
E2F3O00716 TOMM22P2-201ENST00000430735 237 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 308.6 ms