Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 ACA59.2-201ENST00000517061 156 ntBASIC2.88□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.88□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC005562.2-201ENST00000618264 111 ntBASIC2.88□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MIR6852-201ENST00000621699 66 ntBASIC2.88□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-309P-201ENST00000364573 106 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 SNORD18B-201ENST00000365659 72 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-905P-201ENST00000384434 107 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MIR518C-201ENST00000384822 101 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 TOMM22P2-201ENST00000430735 237 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RPS26P45-201ENST00000471748 340 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU7-115P-201ENST00000516433 55 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-762P-201ENST00000517107 102 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MIR3136-201ENST00000583498 78 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AL034555.1-201ENST00000604816 211 ntBASIC2.87□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 Y_RNA.124-201ENST00000363339 93 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 Y_RNA.500-201ENST00000384466 111 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RPL21P3-201ENST00000395517 478 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 U6atac.2-201ENST00000408644 118 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-554P-201ENST00000410466 106 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC090515.1-201ENST00000465295 476 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RPL30P5-201ENST00000494923 336 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 SNORA70.12-201ENST00000516084 153 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-344P-201ENST00000516635 111 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC027176.1-201ENST00000560204 514 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC025166.1-201ENST00000612411 163 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 TCL6_2.1-201ENST00000615162 119 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MIR6076-201ENST00000617521 113 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC069528.2-201ENST00000624849 1991 ntBASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC002543.1-201ENST00000299783 1954 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-647P-201ENST00000364243 107 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 CD24P4-201ENST00000382840 243 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 SNORA72-201ENST00000384339 132 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-106P-201ENST00000384405 107 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 SNORA12.1-201ENST00000390873 148 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 NDUFS5P4-201ENST00000412983 318 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AL365496.1-201ENST00000426885 215 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC104332.2-201ENST00000429959 156 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 NDUFB4P6-201ENST00000436819 366 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 HMGN2P32-201ENST00000444648 269 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC006445.2-201ENST00000510061 472 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RN7SKP19-201ENST00000516016 252 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-1282P-201ENST00000516735 96 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU2-44P-201ENST00000516795 194 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-928P-201ENST00000516876 104 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC021739.1-201ENST00000559631 174 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-640P-201ENST00000363693 105 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-978P-201ENST00000364371 103 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU4-41P-201ENST00000364426 143 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 Y_RNA.346-201ENST00000365385 112 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-49P-201ENST00000384256 107 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 SNORD116-13-201ENST00000384408 92 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-19P-201ENST00000384718 107 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MIR512-1-201ENST00000384913 84 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MIR548B-201ENST00000385247 97 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MIR1278-201ENST00000408753 81 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MIR1289-1-201ENST00000408836 144 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 Y_RNA.617-201ENST00000410920 90 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 HMGN2P10-201ENST00000448085 265 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 UBE2DNL-203ENST00000474922 222 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RPL23AP54-201ENST00000495129 419 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNU6-197P-201ENST00000516680 100 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 RNA5SP380-201ENST00000517190 98 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC105137.2-201ENST00000569073 466 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC131055.1-201ENST00000584626 316 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AL049861.1-201ENST00000603130 150 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 AC006023.1-201ENST00000603944 259 ntBASIC2.84□□□□□ -1.95
C1QTNF3-AMACRE9PGA6 MTND5P18-201ENST00000445624 1801 ntBASIC2.84□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
C1QTNF3-AMACRE9PGA6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 221.6 ms