Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC008264.2-201ENST00000610193 3731 ntBASIC2.38□□□□□ -2.03
CGB1A6NKQ9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.38□□□□□ -2.03
CGB1A6NKQ9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CGB1A6NKQ9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CGB1A6NKQ9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CGB1A6NKQ9 MIR22-201ENST00000362190 85 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 RNU6-834P-201ENST00000362367 110 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 U8.7-201ENST00000364940 136 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 Y_RNA.521-201ENST00000384560 114 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 MIR7-3-201ENST00000384898 110 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 MIR300-201ENST00000401138 83 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 RPS29P6-201ENST00000438196 145 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 RPS27P1-201ENST00000450552 247 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 AC008885.1-201ENST00000514930 301 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 RNU6-1098P-201ENST00000516772 96 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 RNU6-1234P-201ENST00000516877 103 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 MIR4506-201ENST00000584693 77 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 AC011603.4-201ENST00000611325 277 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 AC012314.7-201ENST00000619693 93 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.37□□□□□ -2.03
CGB1A6NKQ9 AC068647.2-201ENST00000637380 353 ntBASIC2.37□□□□□ -2.03
CGB1A6NKQ9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.37□□□□□ -2.03
CGB1A6NKQ9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CGB1A6NKQ9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.36□□□□□ -2.03
CGB1A6NKQ9 Y_RNA.124-201ENST00000363339 93 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 RNU6-271P-201ENST00000363858 105 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 Y_RNA.393-201ENST00000383936 102 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 MIR561-201ENST00000385216 97 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 AL355796.1-201ENST00000406706 323 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 SNORA36B-201ENST00000410438 131 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 RNU4-43P-201ENST00000410628 137 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 RNU6-383P-201ENST00000410864 94 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 AL121890.1-201ENST00000435457 205 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 AC006028.1-201ENST00000438379 402 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.36□□□□□ -2.03
CGB1A6NKQ9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.36□□□□□ -2.03
CGB1A6NKQ9 RNU7-57P-201ENST00000459540 60 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.36□□□□□ -2.03
CGB1A6NKQ9 RNU4-57P-201ENST00000515980 135 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 RNU6-561P-201ENST00000516222 102 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 RNU6-1337P-201ENST00000516525 95 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 RNU6-586P-201ENST00000517265 104 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.36□□□□□ -2.03
CGB1A6NKQ9 AP003357.1-201ENST00000604497 148 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 AL355297.2-201ENST00000604792 129 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 AP001340.1-201ENST00000624405 217 ntBASIC2.36□□□□□ -2.03
CGB1A6NKQ9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CGB1A6NKQ9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CGB1A6NKQ9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CGB1A6NKQ9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 RNU6-1325P-201ENST00000364905 105 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 RNU6-1323P-201ENST00000384025 107 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 RNU6-44P-201ENST00000384045 107 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 SNORA20B-201ENST00000384220 132 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 RNU6-768P-201ENST00000384683 107 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 MIR181B1-201ENST00000385240 110 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 SNORA75.5-201ENST00000391291 81 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 AL139095.1-201ENST00000404326 391 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 SNORA11.1-201ENST00000408133 129 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 MIR1283-1-201ENST00000408494 87 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 AC244505.4-201ENST00000434905 287 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 SSXP5-201ENST00000443473 287 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 AC092991.1-201ENST00000477176 376 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 RPL36AP21-201ENST00000490372 323 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.35□□□□□ -2.03
CGB1A6NKQ9 Y_RNA.686-201ENST00000516548 134 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 RNU7-116P-201ENST00000516940 62 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 AC127455.1-201ENST00000565496 145 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 MIR4753-201ENST00000585119 83 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 YPEL5P2-201ENST00000605553 359 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 snoZ196.1-201ENST00000625269 89 ntBASIC2.35□□□□□ -2.03
CGB1A6NKQ9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.35□□□□□ -2.03
CGB1A6NKQ9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CGB1A6NKQ9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CGB1A6NKQ9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CGB1A6NKQ9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CGB1A6NKQ9 SNORA27.1-201ENST00000362604 124 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 SNORD116-13-201ENST00000384408 92 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 MIR887-201ENST00000401258 79 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 SNORA79-201ENST00000408376 140 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 MIR1294-201ENST00000408503 142 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.34□□□□□ -2.03
CGB1A6NKQ9 PRSS3P4-201ENST00000453323 162 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 RNU7-14P-201ENST00000459331 62 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 RPS26P55-201ENST00000471178 356 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 AC010598.1-201ENST00000510378 103 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 AP001328.1-201ENST00000528550 176 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 POLR3GP1-201ENST00000594073 261 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 AC005972.2-201ENST00000604690 348 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 U7.2-201ENST00000607576 63 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 AC090517.3-201ENST00000625170 141 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 AC009487.4-201ENST00000624969 3585 ntBASIC2.34□□□□□ -2.03
CGB1A6NKQ9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
CGB1A6NKQ9 CENPCP1-201ENST00000533085 2578 ntBASIC2.34□□□□□ -2.04
CGB1A6NKQ9 ZNF702P-202ENST00000434269 1966 ntBASIC2.34□□□□□ -2.04
CGB1A6NKQ9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CGB1A6NKQ9 RNU6-525P-201ENST00000363685 104 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms