Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC010154.1-201ENST00000425857 269 ntBASIC2.29□□□□□ -2.04
MBD3L4A6NDZ8 HMGN2P3-201ENST00000433603 273 ntBASIC2.29□□□□□ -2.04
MBD3L4A6NDZ8 HMGN2P5-201ENST00000436882 273 ntBASIC2.29□□□□□ -2.04
MBD3L4A6NDZ8 UBL5P3-201ENST00000475112 231 ntBASIC2.29□□□□□ -2.04
MBD3L4A6NDZ8 AC005786.1-201ENST00000588553 154 ntBASIC2.29□□□□□ -2.04
MBD3L4A6NDZ8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.29□□□□□ -2.04
MBD3L4A6NDZ8 U4.3-201ENST00000621047 82 ntBASIC2.29□□□□□ -2.04
MBD3L4A6NDZ8 CTSLP2-204ENST00000629029 392 ntBASIC2.29□□□□□ -2.04
MBD3L4A6NDZ8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.29□□□□□ -2.04
MBD3L4A6NDZ8 AC131280.1-202ENST00000624067 4211 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 SNORD114-7-201ENST00000362520 77 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 U8.2-201ENST00000363156 134 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 RNA5SP393-201ENST00000363423 117 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 RNU1-96P-201ENST00000364163 162 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 SNORA67.1-201ENST00000364749 141 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 RNA5SP467-201ENST00000391274 118 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 MIR548H3-201ENST00000408771 118 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 SNORA11.4-201ENST00000408823 129 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 RNA5SP320-201ENST00000516263 124 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 RNU6-1337P-201ENST00000516525 95 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 SNORA31.25-201ENST00000517242 134 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 AC007229.1-201ENST00000590455 412 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 U2.14-201ENST00000615943 113 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 MIR7843-201ENST00000622274 79 ntBASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
MBD3L4A6NDZ8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
MBD3L4A6NDZ8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 AL356292.1-201ENST00000283110 373 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 Y_RNA.44-201ENST00000362676 108 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 Y_RNA.352-201ENST00000365439 102 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 AL117342.1-201ENST00000404861 406 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 snoU13.26-201ENST00000459452 105 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 AC097462.1-201ENST00000514125 324 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 RNU6-237P-201ENST00000515985 71 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 RNU6-1278P-201ENST00000516130 107 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 RNU6-191P-201ENST00000516295 94 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 RNU7-172P-201ENST00000517125 64 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 U6.73-201ENST00000619194 103 ntBASIC2.27□□□□□ -2.05
MBD3L4A6NDZ8 RNU1-22P-201ENST00000363334 158 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 SNORA33-201ENST00000363664 130 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 Y_RNA.188-201ENST00000363952 111 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 Y_RNA.341-201ENST00000365341 102 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 RNU6-662P-201ENST00000384253 104 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 Y_RNA.562-201ENST00000384695 113 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 RNU6-376P-201ENST00000384731 106 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 MIR515-2-201ENST00000384883 83 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 MIR515-1-201ENST00000384884 83 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 CST2P1-201ENST00000425770 87 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 AC099677.2-201ENST00000436385 175 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 RPL39P40-201ENST00000445481 146 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 HSPE1P13-201ENST00000451143 297 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 RPS29P21-201ENST00000496272 170 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 HMGB3P3-201ENST00000510526 400 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 RNU6-63P-201ENST00000516690 95 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 RNU6-1271P-201ENST00000517049 105 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 AC006006.1-201ENST00000603082 144 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 AL359075.3-201ENST00000613288 217 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 AC022513.1-201ENST00000624512 117 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 ZNF271P-202ENST00000465539 1970 ntBASIC2.26□□□□□ -2.05
MBD3L4A6NDZ8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 SNORD27-201ENST00000363981 72 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 Y_RNA.447-201ENST00000384184 113 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 SNORA8-201ENST00000384574 139 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 MIR518C-201ENST00000384822 101 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 AL603910.2-201ENST00000407268 136 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 SNORA3.2-201ENST00000408221 125 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 SNORD88.1-201ENST00000408684 91 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 RPS15AP28-201ENST00000435088 386 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 SNORA27.4-201ENST00000516650 95 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 RNU1-142P-201ENST00000516682 145 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 AC110588.1-201ENST00000559699 137 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 AC009127.3-201ENST00000570531 403 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 MIR3128-201ENST00000581957 66 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 AC069114.2-201ENST00000604699 304 ntBASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
MBD3L4A6NDZ8 ZNF658B-202ENST00000615961 3375 ntBASIC2.24□□□□□ -2.05
MBD3L4A6NDZ8 Y_RNA.60-201ENST00000362831 98 ntBASIC2.24□□□□□ -2.05
MBD3L4A6NDZ8 Y_RNA.172-201ENST00000363765 102 ntBASIC2.24□□□□□ -2.05
MBD3L4A6NDZ8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.24□□□□□ -2.05
MBD3L4A6NDZ8 SNORD116-13-201ENST00000384408 92 ntBASIC2.24□□□□□ -2.05
MBD3L4A6NDZ8 MIR504-201ENST00000385065 83 ntBASIC2.24□□□□□ -2.05
MBD3L4A6NDZ8 MIR181B1-201ENST00000385240 110 ntBASIC2.24□□□□□ -2.05
MBD3L4A6NDZ8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms