Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 AC073464.1-201ENST00000429823 534 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 AC092628.1-201ENST00000436250 252 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 MRPS10P1-201ENST00000448483 130 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 MTCO1P29-201ENST00000496868 288 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 Y_RNA.654-201ENST00000497848 106 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 AC113410.1-201ENST00000505029 247 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 SNORA70.12-201ENST00000516084 153 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 RNU2-56P-201ENST00000516826 190 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 MTATP6P24-201ENST00000576835 677 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 AC005730.3-201ENST00000583067 366 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 AP001330.5-201ENST00000607176 411 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 AL096861.1-201ENST00000610899 123 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 MIR6779-201ENST00000617283 64 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 AL158209.2-201ENST00000619266 216 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 MTND4P12-201ENST00000498999 1377 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 AC121333.1-201ENST00000567488 2709 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 SNORD113-7-201ENST00000363762 77 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 Y_RNA.330-201ENST00000365230 109 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 Y_RNA.415-201ENST00000384012 112 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 RNU6-214P-201ENST00000384130 107 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 SNORD37.1-201ENST00000390968 65 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 RN7SKP142-201ENST00000411236 328 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 RNU6-1208P-201ENST00000459588 107 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC010469.2-201ENST00000496412 480 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 OR9P1P-201ENST00000496431 281 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 SNORA19.2-201ENST00000516013 114 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 SNORD111.1-201ENST00000516421 86 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC027288.2-201ENST00000553028 243 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 MIR4711-201ENST00000578274 70 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC087752.4-201ENST00000605911 462 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC004832.4-201ENST00000608952 331 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC092807.2-201ENST00000609367 243 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AL391903.3-201ENST00000612158 163 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 AC091931.1-201ENST00000623488 728 ntBASIC0.44□□□□□ -2.34
USH1CQ9Y6N9 RNU6-137P-201ENST00000363680 108 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 RNU6-522P-201ENST00000364497 107 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 MIR32-201ENST00000384965 70 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 SNORD99-201ENST00000408612 74 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 Z82188.1-201ENST00000436709 154 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 SNORD65B-201ENST00000459126 73 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 AC098869.1-201ENST00000481627 292 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 AC091885.1-201ENST00000506658 268 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 RNU6-496P-201ENST00000516145 99 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 RNU7-28P-201ENST00000516759 62 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 RNU6-1198P-201ENST00000516904 67 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 AL117336.2-201ENST00000602435 335 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 AL158063.1-201ENST00000615349 536 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 AC006435.5-201ENST00000624486 112 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 AC010487.4-201ENST00000637027 61 ntBASIC0.43□□□□□ -2.34
USH1CQ9Y6N9 AC005592.1-201ENST00000566527 1640 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 AL589743.1-201ENST00000551932 2712 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 Y_RNA.1-201ENST00000352915 104 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 MIRLET7C-201ENST00000362160 84 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 Y_RNA.169-201ENST00000363745 96 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 Y_RNA.267-201ENST00000364679 109 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 MIR193B-201ENST00000384907 83 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 CALM2P3-201ENST00000400429 449 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 AL590002.1-201ENST00000406554 418 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 RNU6-261P-201ENST00000459506 102 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 AC083798.1-201ENST00000472671 131 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 AC104383.1-201ENST00000530297 370 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 MTND1P15-201ENST00000579262 949 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 AC091178.2-201ENST00000584401 117 ntBASIC0.42□□□□□ -2.34
USH1CQ9Y6N9 RNU6-873P-201ENST00000363833 107 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 Y_RNA.319-201ENST00000365138 92 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 RNU4-66P-201ENST00000365199 138 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 SNORD89-201ENST00000390981 114 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 EIF4E2P1-201ENST00000393781 255 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 RNU6-648P-201ENST00000410190 107 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 AC244023.1-201ENST00000426884 112 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 AC092423.1-201ENST00000430165 186 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 MTND4P18-201ENST00000447010 465 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 RNU7-187P-201ENST00000458985 68 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 AC091179.3-201ENST00000474761 144 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 RNU6-835P-201ENST00000516974 104 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 AC018659.1-201ENST00000551083 169 ntBASIC0.41□□□□□ -2.34
USH1CQ9Y6N9 AC023827.1-201ENST00000569247 97 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms